Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
SMIM28A0A1B0GU29 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-450P-201ENST00000364654 107 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 U8.7-201ENST00000364940 136 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AC117470.1-201ENST00000381974 330 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-969P-201ENST00000383900 105 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.456-201ENST00000384232 111 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-710P-201ENST00000410424 105 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AC004941.2-201ENST00000427009 228 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 LINC01399-202ENST00000458450 244 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 snoU13.18-201ENST00000459483 104 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 HMGN1P10-201ENST00000474557 553 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU7-41P-201ENST00000515917 61 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-397P-201ENST00000516226 104 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AC127455.1-201ENST00000565496 145 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AP001094.1-201ENST00000579805 193 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 C8orf59P2-201ENST00000603441 271 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AP003357.1-201ENST00000604497 148 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 RAC1P9-201ENST00000604990 392 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 AC108706.1-201ENST00000611053 297 ntBASIC0.86□□□□□ -2.27
SMIM28A0A1B0GU29 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 RNU4-50P-201ENST00000364361 141 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 SNORD14.1-201ENST00000365609 90 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.383-201ENST00000383855 97 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.418-201ENST00000384029 102 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-21P-201ENST00000384710 107 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 RPL39P39-201ENST00000455840 151 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 AC245047.8-201ENST00000456455 284 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 SNORD124-201ENST00000459577 104 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 NDUFA4P2-201ENST00000489989 244 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 AC117454.1-201ENST00000491120 168 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 RNU7-115P-201ENST00000516433 55 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 MIR4300-201ENST00000581016 96 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 POLR3GP1-201ENST00000594073 261 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 MIR548AY-201ENST00000617669 107 ntBASIC0.85□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.105-201ENST00000363182 111 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.118-201ENST00000363300 101 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.203-201ENST00000364106 102 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 Y_RNA.354-201ENST00000365448 111 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-131P-201ENST00000391144 107 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 RNU6-1170P-201ENST00000515974 106 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 DEFB108E-201ENST00000524692 240 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.84□□□□□ -2.27
SMIM28A0A1B0GU29 snoU2-30.1-201ENST00000365012 70 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.445-201ENST00000384168 102 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-474P-201ENST00000384243 107 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.526-201ENST00000384572 110 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 MIR489-201ENST00000384923 84 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD12-201ENST00000391002 90 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA26.5-201ENST00000391215 123 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 MIR1278-201ENST00000408753 81 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 HSPE1P25-201ENST00000455484 251 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 RNU7-141P-201ENST00000459304 62 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 RPL23AP54-201ENST00000495129 419 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA74.3-201ENST00000517108 154 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 AC104695.3-201ENST00000604052 296 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 AC090971.5-201ENST00000621102 293 ntBASIC0.83□□□□□ -2.28
SMIM28A0A1B0GU29 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-1084P-201ENST00000362498 107 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA25.3-201ENST00000363205 127 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-801P-201ENST00000364087 105 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.222-201ENST00000364264 102 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-823P-201ENST00000391042 103 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 SNRPGP14-201ENST00000435400 219 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 POLR2KP2-201ENST00000438155 177 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 RNU7-21P-201ENST00000459430 62 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA18.7-201ENST00000516910 131 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 RNU7-116P-201ENST00000516940 62 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.715-201ENST00000517082 110 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 AC005357.1-201ENST00000588399 301 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 MIR376A1-201ENST00000616574 68 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 MIR7111-201ENST00000619751 72 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 AC068700.1-201ENST00000565862 3754 ntBASIC0.82□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.138-201ENST00000363462 102 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD113-8-201ENST00000363497 74 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-1209P-201ENST00000363655 107 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA72.4-201ENST00000384174 132 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 MIR136-201ENST00000385207 82 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 MIR1185-1-201ENST00000408598 86 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-121P-201ENST00000410525 99 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 AC022028.1-201ENST00000412054 408 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms