Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SCARNA24.2-201ENST00000516968 130 ntBASIC1.47□□□□□ -2.17
CCDC196A0A1B0GTZ2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.47□□□□□ -2.17
CCDC196A0A1B0GTZ2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.47□□□□□ -2.17
CCDC196A0A1B0GTZ2 MIR4762-201ENST00000585261 75 ntBASIC1.47□□□□□ -2.17
CCDC196A0A1B0GTZ2 AC005357.1-201ENST00000588399 301 ntBASIC1.47□□□□□ -2.17
CCDC196A0A1B0GTZ2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.47□□□□□ -2.17
CCDC196A0A1B0GTZ2 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.136-201ENST00000363444 102 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.276-201ENST00000364732 109 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-662P-201ENST00000384253 104 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.512-201ENST00000384518 102 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 MIR802-201ENST00000390235 94 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-437P-201ENST00000459408 95 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-1143P-201ENST00000516125 104 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
CCDC196A0A1B0GTZ2 SNORA63-201ENST00000363450 132 ntBASIC1.45□□□□□ -2.18
CCDC196A0A1B0GTZ2 MIR452-201ENST00000385020 85 ntBASIC1.45□□□□□ -2.18
CCDC196A0A1B0GTZ2 RPL23AP91-201ENST00000569211 455 ntBASIC1.45□□□□□ -2.18
CCDC196A0A1B0GTZ2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNA5SP432-201ENST00000362480 116 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.84-201ENST00000363011 104 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-238P-201ENST00000363313 106 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-694P-201ENST00000364071 147 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 BTF3P11-201ENST00000426582 477 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 AL731563.1-201ENST00000442202 214 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 AC091959.1-201ENST00000495857 238 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 AC006504.6-201ENST00000590142 199 ntBASIC1.44□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-899P-201ENST00000363947 107 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 SNORD14E-201ENST00000364009 85 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-713P-201ENST00000384761 107 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-635P-201ENST00000516651 102 ntBASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.326-201ENST00000365176 113 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.422-201ENST00000384054 114 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 RPL39P39-201ENST00000455840 151 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 AC048334.1-201ENST00000477975 159 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 SNORA31.2-201ENST00000516019 134 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 RN7SKP179-201ENST00000516126 217 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 SNORD111.1-201ENST00000516421 86 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 DEFB108E-201ENST00000524692 240 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC196A0A1B0GTZ2 Y_RNA.293-201ENST00000364908 93 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-326P-201ENST00000365480 107 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-1011P-201ENST00000384668 107 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 HMGN2P32-201ENST00000444648 269 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 AC090142.3-201ENST00000519012 385 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 MIR2681-201ENST00000581814 105 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 AL357312.1-201ENST00000603879 298 ntBASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
CCDC196A0A1B0GTZ2 RNU6-383P-201ENST00000410864 94 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 MTND4LP30-201ENST00000454092 297 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.637-201ENST00000459424 114 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 AL133373.1-201ENST00000497098 94 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-1338P-201ENST00000516328 91 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 SNORA18.7-201ENST00000516910 131 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.720-201ENST00000517166 92 ntBASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC196A0A1B0GTZ2 AL391987.6-201ENST00000305671 199 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-1272P-201ENST00000362776 107 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 MIR606-201ENST00000384851 96 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-1109P-201ENST00000391187 107 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 AC013791.1-201ENST00000616619 62 ntBASIC1.39□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-1160P-201ENST00000384546 104 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-1203P-201ENST00000410703 110 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 TRBVB-201ENST00000477100 408 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 SERF1AP1-201ENST00000514575 187 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 AC008737.2-201ENST00000599446 118 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.812-201ENST00000610788 101 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 AL096861.1-201ENST00000610899 123 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.784-201ENST00000613803 101 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.787-201ENST00000616522 101 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.780-201ENST00000617336 101 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 AC007742.2-201ENST00000618226 398 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 Y_RNA.801-201ENST00000619005 101 ntBASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-674P-201ENST00000363831 107 ntBASIC1.37□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-969P-201ENST00000383900 105 ntBASIC1.37□□□□□ -2.19
CCDC196A0A1B0GTZ2 RNU6-910P-201ENST00000390844 107 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms