Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.99-201ENST00000363138 105 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.247-201ENST00000364500 92 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 SNORA25B-201ENST00000365507 128 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 MIR592-201ENST00000384959 97 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.621-201ENST00000411065 96 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 AC060773.1-201ENST00000421698 310 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 AC090844.1-201ENST00000422019 156 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 AC091932.4-201ENST00000623386 200 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 AL512310.12-203ENST00000640543 90 ntBASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
DNMT3AQ9Y6K1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 MIR340-201ENST00000362125 95 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 snoU2-30.2-201ENST00000362805 70 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.253-201ENST00000364562 112 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 SNORA1.1-201ENST00000364671 133 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-283P-201ENST00000364788 107 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.440-201ENST00000384120 114 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-649P-201ENST00000384463 107 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 MIR548O-201ENST00000408583 114 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 RNA5SP144-201ENST00000410846 116 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 AL161932.1-201ENST00000437408 146 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 AC018868.1-201ENST00000491307 315 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 SNORA70.18-201ENST00000516696 98 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 AC026333.2-201ENST00000542164 106 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 SEPT14P17-201ENST00000617978 177 ntBASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DNMT3AQ9Y6K1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-1313P-201ENST00000362622 102 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 RNA5SP387-201ENST00000364226 106 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-499P-201ENST00000365615 107 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 MIR9-2-201ENST00000384838 87 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 MIR7-3-201ENST00000384898 110 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 RNU7-153P-201ENST00000516455 62 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 RNU7-25P-201ENST00000516544 62 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 AC019176.2-201ENST00000611579 315 ntBASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.37-201ENST00000362606 108 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 Y_RNA.351-201ENST00000365436 96 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-800P-201ENST00000384473 103 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 AC244505.4-201ENST00000434905 287 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 SSXP5-201ENST00000443473 287 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 RN7SL293P-201ENST00000481765 281 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 RNU7-99P-201ENST00000516271 62 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 MIR3922-201ENST00000585192 84 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 AL353149.1-201ENST00000610667 244 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 U4.6-201ENST00000621618 127 ntBASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DNMT3AQ9Y6K1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 RNA5SP50-201ENST00000363731 107 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-1163P-201ENST00000364516 107 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 MIR670-201ENST00000390142 98 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 SNORA26.7-201ENST00000391288 122 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 RN7SKP200-201ENST00000410564 320 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-634P-201ENST00000459134 106 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 snoU13.22-201ENST00000459428 104 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 AC108729.3-201ENST00000513484 108 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 AL359075.3-201ENST00000613288 217 ntBASIC3.42□□□□□ -1.86
DNMT3AQ9Y6K1 MIR627-201ENST00000384979 97 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-613P-201ENST00000410412 108 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 RNU6-1186P-201ENST00000410429 97 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 SNX2P2-201ENST00000424553 323 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 RN7SL636P-201ENST00000497504 294 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 SNORA70.19-201ENST00000516717 90 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 MIR4738-201ENST00000579134 87 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 AC022149.2-201ENST00000621061 203 ntBASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DNMT3AQ9Y6K1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
DNMT3AQ9Y6K1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
DNMT3AQ9Y6K1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
DNMT3AQ9Y6K1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 MIR342-201ENST00000362212 99 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORA71.3-201ENST00000362582 128 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORD115-39-201ENST00000363694 82 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORD115-28-201ENST00000363931 81 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-160P-201ENST00000384591 107 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 MIR515-2-201ENST00000384883 83 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms