Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 MIRLET7C-201ENST00000362160 84 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-199P-201ENST00000362954 107 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR522-201ENST00000385071 87 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 AC015712.3-201ENST00000559380 164 ntBASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A3BPQ9Y5P4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL4A3BPQ9Y5P4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-833P-201ENST00000363486 107 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 SNORD1A-201ENST00000364968 72 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-1289P-201ENST00000384431 106 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR548H3-201ENST00000408771 118 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 RNA5SP445-201ENST00000515889 115 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR4778-201ENST00000577635 80 ntBASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A3BPQ9Y5P4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR367-201ENST00000362299 68 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-196P-201ENST00000384315 107 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 RPL31P63-201ENST00000422565 375 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 SNX2P2-201ENST00000424553 323 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 HMGN2P32-201ENST00000444648 269 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 AC023449.1-201ENST00000454464 154 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 CBX3P4-201ENST00000538909 354 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR4285-201ENST00000581001 85 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 U4.1-201ENST00000620349 87 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 snoU18.1-201ENST00000629629 71 ntBASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A3BPQ9Y5P4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A3BPQ9Y5P4 RNA5SP432-201ENST00000362480 116 ntBASIC2.06□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.293-201ENST00000364908 93 ntBASIC2.06□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-969P-201ENST00000383900 105 ntBASIC2.06□□□□□ -2.08
COL4A3BPQ9Y5P4 AC107393.1-201ENST00000512403 346 ntBASIC2.06□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 RN7SKP51-201ENST00000410781 304 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 CYCSP49-201ENST00000420810 319 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 AC027119.1-201ENST00000440877 241 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-322P-201ENST00000516010 103 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR4724-201ENST00000579485 89 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR4769-201ENST00000584126 77 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 AL008718.3-201ENST00000610217 321 ntBASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A3BPQ9Y5P4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 SNORA16.1-201ENST00000364597 132 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-740P-201ENST00000364734 105 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 RNU6-211P-201ENST00000384047 107 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR452-201ENST00000385020 85 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR568-201ENST00000385036 95 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR802-201ENST00000390235 94 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.590-201ENST00000410140 107 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 PIGPP3-201ENST00000425307 415 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 SNORD127-201ENST00000458892 86 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 RPL39P38-201ENST00000467018 153 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.679-201ENST00000516416 91 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 AC019176.1-201ENST00000518519 225 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR5688-201ENST00000580619 83 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.771-201ENST00000598668 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.789-201ENST00000622480 102 ntBASIC2.04□□□□□ -2.08
COL4A3BPQ9Y5P4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 Y_RNA.668-201ENST00000516233 93 ntBASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 SNORD45.4-201ENST00000516629 73 ntBASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 RPL23AP91-201ENST00000569211 455 ntBASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 AC012433.1-201ENST00000588916 398 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms