Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.460-201ENST00000384255 102 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-308P-201ENST00000390957 107 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-130P-201ENST00000411112 103 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 U8.19-201ENST00000459095 133 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-922P-201ENST00000516753 99 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 MIR4762-201ENST00000585261 75 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 MIR6788-201ENST00000618842 66 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 AC090574.1-201ENST00000623186 233 ntBASIC1.19□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.61-201ENST00000362835 102 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 U8.5-201ENST00000364528 136 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.456-201ENST00000384232 111 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-474P-201ENST00000384243 107 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORA72-201ENST00000384339 132 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-855P-201ENST00000410395 104 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 HMGN1P10-201ENST00000474557 553 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 CYCTP-201ENST00000504253 315 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORD116-28-201ENST00000516123 91 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 DEFB117-201ENST00000602356 141 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 AC120024.3-201ENST00000603167 156 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 MTND4P29-201ENST00000503122 1372 ntBASIC1.18□□□□□ -2.22
PCDHGA1Q9Y5H4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORA63.7-201ENST00000365579 123 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.535-201ENST00000384612 99 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-21P-201ENST00000384710 107 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORD41-201ENST00000386967 70 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 MIR891A-201ENST00000401237 79 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU4-30P-201ENST00000410245 143 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 AC024067.1-201ENST00000426199 223 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 AC010655.3-201ENST00000478818 450 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 SEPT14P8-201ENST00000508026 178 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 AC124312.5-201ENST00000604451 268 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 AC068647.2-201ENST00000637380 353 ntBASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.128-201ENST00000363391 112 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.148-201ENST00000363557 117 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-163P-201ENST00000384396 106 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 RPL39P39-201ENST00000455840 151 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU7-116P-201ENST00000516940 62 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 AC136932.1-201ENST00000574771 208 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 AC104695.3-201ENST00000604052 296 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 SNORD113-5-201ENST00000607261 78 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 AC012676.2-201ENST00000619258 186 ntBASIC1.16□□□□□ -2.22
PCDHGA1Q9Y5H4 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-342P-201ENST00000384521 104 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR522-201ENST00000385071 87 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-823P-201ENST00000391042 103 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AL590004.1-201ENST00000405321 300 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.604-201ENST00000410574 102 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 PIGPP3-201ENST00000425307 415 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AC015922.2-201ENST00000435593 184 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AC114811.1-201ENST00000507207 168 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 AC134503.1-201ENST00000633048 54 ntBASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.394-201ENST00000383942 103 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR598-201ENST00000384868 97 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR526A1-201ENST00000384897 85 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 AC104332.1-201ENST00000440471 797 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 RNU6-988P-201ENST00000519081 107 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR3145-201ENST00000580727 82 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 POLR3GP1-201ENST00000594073 261 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
PCDHGA1Q9Y5H4 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms