Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AC021506.2-201ENST00000612354 169 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
YIPF1Q9Y548 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
YIPF1Q9Y548 SNORA72-201ENST00000384339 132 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
YIPF1Q9Y548 MTCO2P33-201ENST00000402100 465 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.55□□□□□ -2.16
YIPF1Q9Y548 FTH1P12-201ENST00000432137 551 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 JTBP1-201ENST00000441314 247 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 U8.19-201ENST00000459095 133 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 RNU7-141P-201ENST00000459304 62 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 Y_RNA.637-201ENST00000459424 114 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 RNU7-115P-201ENST00000516433 55 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 SNORA27.4-201ENST00000516650 95 ntBASIC1.55□□□□□ -2.16
YIPF1Q9Y548 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
YIPF1Q9Y548 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
YIPF1Q9Y548 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
YIPF1Q9Y548 MIR337-201ENST00000362281 93 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 SNORA7.1-201ENST00000363750 139 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 RNU4-41P-201ENST00000364426 143 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 SNORA72.4-201ENST00000384174 132 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 RNU6-763P-201ENST00000390865 106 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 AL034345.1-201ENST00000407768 123 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 Z98949.2-201ENST00000440996 144 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 AL358944.1-201ENST00000528537 144 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 AP003357.1-201ENST00000604497 148 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 U6.104-201ENST00000637979 90 ntBASIC1.54□□□□□ -2.16
YIPF1Q9Y548 MIR194-1-201ENST00000384892 85 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.53□□□□□ -2.16
YIPF1Q9Y548 MTND4LP30-201ENST00000454092 297 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 RPL23AP54-201ENST00000495129 419 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 OR9P1P-201ENST00000496431 281 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 RNU7-116P-201ENST00000516940 62 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 SNORA44.1-201ENST00000517031 108 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
YIPF1Q9Y548 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 AL162424.1-201ENST00000602325 221 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 SNORA28-201ENST00000606769 126 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 MIR548AY-201ENST00000617669 107 ntBASIC1.53□□□□□ -2.16
YIPF1Q9Y548 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.53□□□□□ -2.16
YIPF1Q9Y548 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.53□□□□□ -2.16
YIPF1Q9Y548 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
YIPF1Q9Y548 MIR424-201ENST00000362227 98 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 Y_RNA.327-201ENST00000365201 102 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 RNU6-574P-201ENST00000384265 107 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 MIR1302-3-201ENST00000408128 138 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 AL161935.2-201ENST00000414627 60 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 CALM2P4-201ENST00000430810 426 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 RNU7-28P-201ENST00000516759 62 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 MIR4503-201ENST00000582187 83 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 AL162730.1-201ENST00000605734 292 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 AL591926.4-201ENST00000616895 298 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 snoU18.1-201ENST00000629629 71 ntBASIC1.52□□□□□ -2.17
YIPF1Q9Y548 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.52□□□□□ -2.17
YIPF1Q9Y548 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
YIPF1Q9Y548 MIR335-201ENST00000362173 94 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 RNU6-1272P-201ENST00000362776 107 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 Y_RNA.117-201ENST00000363294 101 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 Y_RNA.217-201ENST00000364214 105 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 RNA5SP482-201ENST00000391269 118 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 SNORA36B-201ENST00000410438 131 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.51□□□□□ -2.17
YIPF1Q9Y548 BTF3P11-201ENST00000426582 477 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 SNORD127-201ENST00000458892 86 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 Y_RNA.641-201ENST00000459414 105 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 RNA5SP168-201ENST00000516642 112 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 RNU6-1116P-201ENST00000517269 99 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 AC127455.1-201ENST00000565496 145 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 AC012433.1-201ENST00000588916 398 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 AC073349.3-201ENST00000617616 186 ntBASIC1.51□□□□□ -2.17
YIPF1Q9Y548 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
YIPF1Q9Y548 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
YIPF1Q9Y548 UBE2WP1-201ENST00000362030 340 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 Y_RNA.44-201ENST00000362676 108 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 SNORD68-201ENST00000363214 84 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 RNU6-899P-201ENST00000363947 107 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 RNU6-740P-201ENST00000364734 105 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 RNU6-1289P-201ENST00000384431 106 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 RNU2-38P-201ENST00000410856 79 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 PGBD4P5-201ENST00000445958 426 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 AL078604.3-201ENST00000615580 211 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 AC068700.1-201ENST00000565862 3754 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
YIPF1Q9Y548 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms