Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 RNY4P30-201ENST00000410216 95 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 AL049830.1-201ENST00000468034 425 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 RNY4P20-201ENST00000516678 93 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 AC024995.1-201ENST00000523014 93 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 MIR3200-201ENST00000580767 85 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 AC134878.1-201ENST00000619901 243 ntBASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.92□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.198-201ENST00000364013 98 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 Y_RNA.323-201ENST00000365157 109 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 MIR634-201ENST00000385208 97 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 RNA5SP323-201ENST00000391094 133 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 CST2P1-201ENST00000425770 87 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 RNU7-94P-201ENST00000459576 63 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 AC091826.1-201ENST00000514065 313 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 AC004486.1-201ENST00000546846 233 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 RNU6-94P-201ENST00000607728 107 ntBASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
AP4E1Q9UPM8 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.94
AP4E1Q9UPM8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
AP4E1Q9UPM8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
AP4E1Q9UPM8 RNU6-349P-201ENST00000362402 107 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 RNU6-1014P-201ENST00000383940 103 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 RNU6-1189P-201ENST00000383958 107 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 RNU6-442P-201ENST00000383968 104 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 SNORA48.2-201ENST00000390926 124 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 MIR1262-201ENST00000408276 93 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 MIR1302-4-201ENST00000408701 150 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 Z92545.1-201ENST00000411782 234 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 RPL39P34-201ENST00000477141 156 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 TRBV12-1-201ENST00000479785 344 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 AL163195.1-201ENST00000496941 348 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 ZNF861P-201ENST00000588126 639 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 AP001318.4-201ENST00000616637 121 ntBASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP4E1Q9UPM8 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 RNU6-268P-201ENST00000364174 107 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 Y_RNA.362-201ENST00000365518 110 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 SNORA51.5-201ENST00000384126 131 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 RNU6-160P-201ENST00000384591 107 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 RNU6-443P-201ENST00000384780 107 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 MIR802-201ENST00000390235 94 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 AL590004.2-201ENST00000404787 371 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 MIR1302-5-201ENST00000408164 150 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 HMGN2P32-201ENST00000444648 269 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.89□□□□□ -1.95
AP4E1Q9UPM8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 Y_RNA.37-201ENST00000362606 108 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORD68-201ENST00000363214 84 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORA63.5-201ENST00000363548 123 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORD115-28-201ENST00000363931 81 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORD14E-201ENST00000364009 85 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORA2.2-201ENST00000365473 135 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORA51.10-201ENST00000384418 136 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 Y_RNA.547-201ENST00000384654 119 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 MT-TI-201ENST00000387365 69 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 AL135938.1-201ENST00000443141 297 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 SNORD36C-201ENST00000516733 66 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 MIR3605-201ENST00000583214 100 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 CTSLP2-204ENST00000629029 392 ntBASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
AP4E1Q9UPM8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 Y_RNA.49-201ENST00000362714 112 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 RNU6-690P-201ENST00000365242 106 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 NDUFB4P4-201ENST00000404822 243 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 RNU6-938P-201ENST00000411285 103 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 RNA5SP492-201ENST00000411330 114 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 RNU6-830P-201ENST00000516353 107 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 MIR6733-201ENST00000635723 61 ntBASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.87□□□□□ -1.95
AP4E1Q9UPM8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
AP4E1Q9UPM8 AL589743.1-201ENST00000551932 2712 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms