| MAFF | Q9ULX9 | Y_RNA.267-201 | ENST00000364679 | 109 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.412-201 | ENST00000384001 | 104 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNA5SP323-201 | ENST00000391094 | 133 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | 5S_rRNA.2-201 | ENST00000391293 | 112 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC018511.2-201 | ENST00000413431 | 189 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL354733.1-201 | ENST00000458016 | 476 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC009930.1-201 | ENST00000522330 | 191 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC104819.3-201 | ENST00000603264 | 540 nt | TSL 4 BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.802-201 | ENST00000614892 | 130 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | SYT14-201 | ENST00000367015 | 5094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | ZNF644-212 | ENST00000621077 | 2056 nt | TSL 5 BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | SNORD114-7-201 | ENST00000362520 | 77 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-1323P-201 | ENST00000384025 | 107 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-804P-201 | ENST00000384286 | 107 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU4-70P-201 | ENST00000384579 | 139 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.555-201 | ENST00000384673 | 110 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR1283-2-201 | ENST00000408621 | 87 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU5E-9P-201 | ENST00000411164 | 104 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | KRTAP25-1-201 | ENST00000416044 | 370 nt | APPRIS P1 BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL121580.1-201 | ENST00000449941 | 219 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | TRAPPC2P7-201 | ENST00000509650 | 231 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-1278P-201 | ENST00000516130 | 107 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6ATAC12P-201 | ENST00000516542 | 115 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-255P-201 | ENST00000516957 | 105 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR5094-201 | ENST00000578766 | 85 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR5089-201 | ENST00000580047 | 84 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR4713-201 | ENST00000582691 | 75 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC012493.3-201 | ENST00000604494 | 112 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL353997.5-201 | ENST00000618886 | 171 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC021753.1-201 | ENST00000635724 | 168 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR367-201 | ENST00000362299 | 68 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.7-201 | ENST00000362352 | 102 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-818P-201 | ENST00000364837 | 108 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | FO680682.1-201 | ENST00000421261 | 345 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNVU1-2-201 | ENST00000516326 | 135 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL035078.1-202 | ENST00000531627 | 413 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MRPS18CP4-201 | ENST00000535821 | 231 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR4724-201 | ENST00000579485 | 89 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL365434.2-201 | ENST00000607979 | 234 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR6845-201 | ENST00000613182 | 61 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | U1.36-201 | ENST00000620684 | 176 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-437P-201 | ENST00000459408 | 95 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU7-99P-201 | ENST00000516271 | 62 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MTND5P41-201 | ENST00000517498 | 206 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.180-201 | ENST00000363867 | 113 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL592431.2-201 | ENST00000422198 | 171 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | SEPT7P4-201 | ENST00000437076 | 306 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.797-201 | ENST00000515977 | 94 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.662-201 | ENST00000516028 | 97 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU6-1062P-201 | ENST00000383908 | 107 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | SNORA72-201 | ENST00000384339 | 132 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | CYCSP49-201 | ENST00000420810 | 319 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC068658.1-201 | ENST00000507509 | 388 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU1-40P-201 | ENST00000516816 | 164 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RNU1-97P-201 | ENST00000516872 | 164 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | RPL23AP91-201 | ENST00000569211 | 455 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC022217.4-201 | ENST00000604389 | 163 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AL353149.1-201 | ENST00000610667 | 244 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | AC108706.1-201 | ENST00000611053 | 297 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | 5S_rRNA.11-201 | ENST00000618635 | 84 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| MAFF | Q9ULX9 | Y_RNA.203-201 | ENST00000364106 | 102 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MAFF | Q9ULX9 | Y_RNA.240-201 | ENST00000364469 | 95 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MAFF | Q9ULX9 | RNU6-1130P-201 | ENST00000365434 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MAFF | Q9ULX9 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MAFF | Q9ULX9 | RNU6-1135P-201 | ENST00000411083 | 103 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MAFF | Q9ULX9 | AL445685.2-201 | ENST00000422551 | 342 nt | BASIC | 2.02 | □□□□□ -2.09 | | |