Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 SNORA64-201ENST00000384674 134 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 MIR569-201ENST00000385228 96 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 BX510359.4-201ENST00000423750 193 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 AL606753.1-201ENST00000427435 87 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 RNU7-149P-201ENST00000516739 59 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 AC069114.2-201ENST00000604699 304 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.81□□□□□ -1.96
ZNRF3Q9ULT6 RNU6-768P-201ENST00000384683 107 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 AC099677.2-201ENST00000436385 175 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 RPL39P40-201ENST00000445481 146 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 AL049830.1-201ENST00000468034 425 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 RNA5SP153-201ENST00000516498 76 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 AL160236.1-201ENST00000556317 195 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 Pinc.1-201ENST00000616452 154 ntBASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ZNRF3Q9ULT6 SNORA1B-201ENST00000362535 133 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 SNORA75.5-201ENST00000391291 81 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 RNA5SP492-201ENST00000411330 114 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 RPL23AP42-201ENST00000471152 471 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 RNA5SP458-201ENST00000516188 119 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 ZNF702P-202ENST00000434269 1966 ntBASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.79□□□□□ -1.96
ZNRF3Q9ULT6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 MIR126-201ENST00000362291 85 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 Y_RNA.242-201ENST00000364473 110 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 RNU11-3P-201ENST00000391111 133 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 MLLT10P1-201ENST00000418346 262 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 AC245047.3-201ENST00000429428 127 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 MIR219B-201ENST00000637023 88 ntBASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ZNRF3Q9ULT6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 MIR802-201ENST00000390235 94 ntBASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 SNORA12.1-201ENST00000390873 148 ntBASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 AC245047.4-201ENST00000433189 144 ntBASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 AC010332.2-201ENST00000613083 1904 ntBASIC2.77□□□□□ -1.97
ZNRF3Q9ULT6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 SNORA25.7-201ENST00000364375 127 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 Y_RNA.634-201ENST00000364811 113 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 RNU6-597P-201ENST00000365620 102 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 SNORA67.3-201ENST00000384366 140 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 MIR597-201ENST00000384968 97 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 RNA5SP465-201ENST00000391195 109 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AC069257.2-201ENST00000441819 155 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AC090142.3-201ENST00000519012 385 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AC087685.1-201ENST00000587507 141 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AC120024.3-201ENST00000603167 156 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AL591926.4-201ENST00000616895 298 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 AC022513.1-201ENST00000624512 117 ntBASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNRF3Q9ULT6 Y_RNA.91-201ENST00000363042 107 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 SNORD113-1-201ENST00000365321 69 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 RNU6-81P-201ENST00000365608 104 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 MIR221-201ENST00000385135 110 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 SNORA40-201ENST00000388090 126 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 RNA5SP270-201ENST00000411361 118 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 RNA5SP272-201ENST00000516095 111 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 RNU6-365P-201ENST00000517113 106 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 MIR5094-201ENST00000578766 85 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 AC022217.4-201ENST00000604389 163 ntBASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ZNRF3Q9ULT6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 SNORD68-201ENST00000363214 84 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 RNU6-588P-201ENST00000410281 105 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 MRPS17P9-201ENST00000511924 393 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 AC097639.2-201ENST00000603159 172 ntBASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNRF3Q9ULT6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ZNRF3Q9ULT6 Y_RNA.420-201ENST00000384043 110 ntBASIC2.73□□□□□ -1.97
ZNRF3Q9ULT6 MIR518A2-201ENST00000384966 87 ntBASIC2.73□□□□□ -1.97
ZNRF3Q9ULT6 Y_RNA.586-201ENST00000391146 98 ntBASIC2.73□□□□□ -1.97
ZNRF3Q9ULT6 AL023284.1-201ENST00000403956 276 ntBASIC2.73□□□□□ -1.97
ZNRF3Q9ULT6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZNRF3Q9ULT6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms