Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
CDC42EP3Q9UKI2 MIR126-201ENST00000362291 85 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 U8.5-201ENST00000364528 136 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 AL513328.1-201ENST00000446460 224 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 RNA5SP137-201ENST00000516833 135 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 RNU2-60P-201ENST00000517290 128 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42EP3Q9UKI2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 U8.1-201ENST00000362843 134 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 RNU6-888P-201ENST00000363010 101 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 SNORD61-201ENST00000384252 73 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 MIR9-1-201ENST00000385198 89 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 MIR891A-201ENST00000401237 79 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 AL603914.1-201ENST00000401964 204 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 RNA5SP127-201ENST00000411051 133 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 HMGN2P35-201ENST00000412164 270 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 RN7SL297P-201ENST00000483161 293 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.686-201ENST00000516548 134 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 MIR3121-201ENST00000579680 77 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 AL359881.1-201ENST00000602916 267 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 CTSLP2-204ENST00000629029 392 ntBASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CDC42EP3Q9UKI2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 AP006437.1-201ENST00000641440 3685 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 RNU6-834P-201ENST00000362367 110 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 U8.2-201ENST00000363156 134 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.353-201ENST00000365440 108 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 AL606517.2-201ENST00000442855 241 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 RN7SKP179-201ENST00000516126 217 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.692-201ENST00000516627 105 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.712-201ENST00000517011 92 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 AC090049.2-201ENST00000550377 109 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.757-201ENST00000578934 114 ntBASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDC42EP3Q9UKI2 SNORA1-201ENST00000384107 130 ntBASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 MIR548A2-201ENST00000384956 97 ntBASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 RNU2-52P-201ENST00000410680 190 ntBASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 RNU7-28P-201ENST00000516759 62 ntBASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDC42EP3Q9UKI2 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AC073325.2-201ENST00000339545 159 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 Y_RNA.81-201ENST00000362997 102 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 RNU6-215P-201ENST00000365169 102 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AL158823.1-201ENST00000418441 478 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 BX510359.4-201ENST00000423750 193 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AL158147.1-201ENST00000443970 75 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 RNU7-107P-201ENST00000459121 61 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 RN7SL20P-201ENST00000488827 297 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 SNORA18.4-201ENST00000516440 124 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 SNORA31.15-201ENST00000516771 132 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 MIR3126-201ENST00000577443 74 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AC006441.5-201ENST00000612680 209 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AC064859.1-201ENST00000624741 174 ntBASIC2.34□□□□□ -2.03
CDC42EP3Q9UKI2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.34□□□□□ -2.04
CDC42EP3Q9UKI2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CDC42EP3Q9UKI2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.52-201ENST00000362760 96 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.294-201ENST00000364916 102 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP482-201ENST00000391269 118 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 AL590004.2-201ENST00000404787 371 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 MIR1283-2-201ENST00000408621 87 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 SNRPGP14-201ENST00000435400 219 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 SNRPGP13-201ENST00000442212 177 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.666-201ENST00000516187 112 ntBASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
CDC42EP3Q9UKI2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD115-3-201ENST00000363100 82 ntBASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD20-201ENST00000384550 80 ntBASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 MLLT10P1-201ENST00000418346 262 ntBASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 AC245047.3-201ENST00000429428 127 ntBASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 AC084364.2-201ENST00000546924 395 ntBASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD53-201ENST00000579969 78 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms