Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-801P-201ENST00000364087 105 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 RNU6-424P-201ENST00000384367 105 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 RNU6-651P-201ENST00000411040 105 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 RNU2-14P-201ENST00000411053 191 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 AC024067.1-201ENST00000426199 223 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 RNA5SP168-201ENST00000516642 112 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 MIR4643-201ENST00000577473 78 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
LIMA1Q9UHB6 UBE2WP1-201ENST00000362030 340 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 SNORA25.1-201ENST00000362326 128 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.350-201ENST00000365409 98 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.368-201ENST00000365547 113 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 SNORA53-201ENST00000391141 249 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AC011604.1-201ENST00000545978 196 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AC005972.2-201ENST00000604690 348 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AL365434.2-201ENST00000607979 234 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 MIR7974-201ENST00000615835 79 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.60-201ENST00000362831 98 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 U8.1-201ENST00000362843 134 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 RNU4-41P-201ENST00000364426 143 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 RNU6-662P-201ENST00000384253 104 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 SNORA26.5-201ENST00000391215 123 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 U8.16-201ENST00000391279 133 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 AL603910.2-201ENST00000407268 136 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 RPL39P38-201ENST00000467018 153 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 SNORA27.4-201ENST00000516650 95 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 RNU6-548P-201ENST00000517083 115 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 MIR3128-201ENST00000581957 66 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 AP000942.4-201ENST00000604811 241 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 U6.104-201ENST00000637979 90 ntBASIC1.56□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RNU6-1272P-201ENST00000362776 107 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RNU6-740P-201ENST00000364734 105 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 RPL30P13-201ENST00000418873 348 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 MTND4LP30-201ENST00000454092 297 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.673-201ENST00000516306 88 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 MIR4298-201ENST00000584380 73 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 AL008718.3-201ENST00000610217 321 ntBASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LIMA1Q9UHB6 MIRLET7C-201ENST00000362160 84 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 SNORA72.4-201ENST00000384174 132 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 SNORA72-201ENST00000384339 132 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 RNU6-763P-201ENST00000390865 106 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 Z98949.2-201ENST00000440996 144 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 AC136628.3-201ENST00000521868 290 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 AL121890.5-201ENST00000620848 304 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 AC068647.2-201ENST00000637380 353 ntBASIC1.54□□□□□ -2.16
LIMA1Q9UHB6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.76-201ENST00000362931 109 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.277-201ENST00000364754 102 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 Y_RNA.401-201ENST00000383965 117 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 RNU6-514P-201ENST00000384208 107 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 MT-TG-201ENST00000387429 68 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 SNORD58.1-201ENST00000391313 66 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 AC104332.1-201ENST00000440471 797 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 SNORD2.1-201ENST00000458762 69 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 U8.19-201ENST00000459095 133 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 AC092991.1-201ENST00000477176 376 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 AC011921.3-201ENST00000605540 361 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 AC037487.3-201ENST00000606668 112 ntBASIC1.53□□□□□ -2.16
LIMA1Q9UHB6 AL591926.4-201ENST00000616895 298 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms