Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 SNORA44-201ENST00000384584 132 ntBASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 MIR1912-201ENST00000410389 80 ntBASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 AL159169.1-201ENST00000421119 127 ntBASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 RNU7-170P-201ENST00000459303 61 ntBASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 AC006023.1-201ENST00000603944 259 ntBASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 AL162726.3-218ENST00000636401 95 ntBASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMD1Q9UGP4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-34-201ENST00000362441 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-12-201ENST00000362583 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-29-201ENST00000362834 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-9-201ENST00000362912 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-21-201ENST00000362963 81 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-14-201ENST00000363090 81 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-3-201ENST00000363100 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-13-201ENST00000363358 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-41-201ENST00000363608 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-11-201ENST00000363616 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-5-201ENST00000363633 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-39-201ENST00000363694 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-4-201ENST00000363810 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-16-201ENST00000363887 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-6-201ENST00000363942 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-42-201ENST00000364273 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 Y_RNA.241-201ENST00000364470 117 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-15-201ENST00000364809 81 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-1-201ENST00000364961 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-26-201ENST00000365067 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-10-201ENST00000365073 81 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 RNA5SP126-201ENST00000365092 109 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-43-201ENST00000365503 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-36-201ENST00000365629 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 Y_RNA.558-201ENST00000384685 113 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 RN7SKP43-201ENST00000516173 320 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 MIR3126-201ENST00000577443 74 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SNORD115-40-201ENST00000606510 82 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 AC022513.1-201ENST00000624512 117 ntBASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LIMD1Q9UGP4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
LIMD1Q9UGP4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
LIMD1Q9UGP4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 MIR302B-201ENST00000362188 73 ntBASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 Y_RNA.344-201ENST00000365381 112 ntBASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 SNORA51.10-201ENST00000384418 136 ntBASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 RPL12P50-201ENST00000603116 116 ntBASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIMD1Q9UGP4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 ICE2P2-201ENST00000483823 2787 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 MIRLET7C-201ENST00000362160 84 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 RNU6-833P-201ENST00000363486 107 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 SNORA25.6-201ENST00000364121 118 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 MT-TI-201ENST00000387365 69 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 SNX2P2-201ENST00000424553 323 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 AC015922.2-201ENST00000435593 184 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 RNU6-998P-201ENST00000515894 101 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 IGLV3-17-201ENST00000519099 244 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 MIR4672-201ENST00000583126 81 ntBASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
LIMD1Q9UGP4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 MIR342-201ENST00000362212 99 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 RNA5SP42-201ENST00000364278 115 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 AL022718.1-201ENST00000412004 84 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 RPL39P25-201ENST00000449384 154 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 RNU6-893P-201ENST00000458841 100 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 AC107297.1-201ENST00000459991 176 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 RN7SL330P-201ENST00000469709 307 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 AL442644.1-201ENST00000454390 3105 ntBASIC3.44□□□□□ -1.86
LIMD1Q9UGP4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LIMD1Q9UGP4 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
LIMD1Q9UGP4 MIR449A-201ENST00000362113 91 ntBASIC3.43□□□□□ -1.86
LIMD1Q9UGP4 RNU6-1131P-201ENST00000364955 107 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms