Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SNORD23.1-201ENST00000408212 104 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AC069257.2-201ENST00000441819 155 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 NDUFA4P2-201ENST00000489989 244 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AC120024.3-201ENST00000603167 156 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AC069114.2-201ENST00000604699 304 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 Pinc.1-201ENST00000616452 154 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 MIR6852-201ENST00000621699 66 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AP001340.1-201ENST00000624405 217 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AC022513.1-201ENST00000624512 117 ntBASIC2.55□□□□□ -2
PPARGC1AQ9UBK2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 SNORA1B-201ENST00000362535 133 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 MIR539-201ENST00000365690 78 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 AL049830.1-201ENST00000468034 425 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 RNU6-62P-201ENST00000516526 102 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 RNU7-28P-201ENST00000516759 62 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
PPARGC1AQ9UBK2 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 U8.5-201ENST00000364528 136 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 Y_RNA.251-201ENST00000364551 99 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 FTH1P12-201ENST00000432137 551 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 AC092991.1-201ENST00000477176 376 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 RNU6-479P-201ENST00000516348 105 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 RNU2-56P-201ENST00000516826 190 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 RNU6-365P-201ENST00000517113 106 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 MIR4762-201ENST00000585261 75 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 AC008507.4-201ENST00000585464 127 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 TUG1_4.1-201ENST00000619464 181 ntBASIC2.53□□□□□ -2
PPARGC1AQ9UBK2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 MIR126-201ENST00000362291 85 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 Y_RNA.420-201ENST00000384043 110 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 SNORA67.4-201ENST00000384688 142 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 MTND4LP9-201ENST00000427694 174 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 AL513328.1-201ENST00000446460 224 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 AC090142.3-201ENST00000519012 385 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 AC091544.4-201ENST00000555268 342 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 AL591926.4-201ENST00000616895 298 ntBASIC2.52□□□□□ -2.01
PPARGC1AQ9UBK2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 Y_RNA.66-201ENST00000362862 102 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 Y_RNA.91-201ENST00000363042 107 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-22P-201ENST00000384355 107 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 RNA5SP482-201ENST00000391269 118 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-588P-201ENST00000410281 105 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-504P-201ENST00000516568 104 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 MIR4529-201ENST00000578110 78 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 AL365205.2-201ENST00000594586 68 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 AC022202.1-201ENST00000613515 211 ntBASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PPARGC1AQ9UBK2 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 SNORD24-201ENST00000383884 75 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 Y_RNA.486-201ENST00000384398 107 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 MIR522-201ENST00000385071 87 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 RNU2-51P-201ENST00000410708 197 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 AC245047.3-201ENST00000429428 127 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 MRPS17P9-201ENST00000511924 393 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 MIR1291-201ENST00000627649 87 ntBASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-1082P-201ENST00000364574 107 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 Y_RNA.542-201ENST00000384641 111 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 AC008267.6-201ENST00000441664 139 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 UBE2DNL-203ENST00000474922 222 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 TRBV12-1-201ENST00000479785 344 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 AP001328.1-201ENST00000528550 176 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 AC103810.6-201ENST00000606708 136 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 U7.2-201ENST00000607576 63 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PPARGC1AQ9UBK2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-950P-201ENST00000384651 107 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 MIR518A2-201ENST00000384966 87 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 Y_RNA.584-201ENST00000391090 114 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 MIR1283-2-201ENST00000408621 87 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-313P-201ENST00000516317 112 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms