Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 AL442067.1-201ENST00000613261 223 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 Y_RNA.65-201ENST00000362846 100 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 Y_RNA.265-201ENST00000364677 108 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 Y_RNA.269-201ENST00000364685 89 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 Y_RNA.293-201ENST00000364908 93 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL20A1Q9P218 Y_RNA.515-201ENST00000384535 112 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL20A1Q9P218 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.04□□□□□ -2.08
COL20A1Q9P218 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.04□□□□□ -2.08
COL20A1Q9P218 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 MIR5688-201ENST00000580619 83 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 MIR3683-201ENST00000580847 82 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 AC009779.6-201ENST00000603972 165 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
COL20A1Q9P218 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL20A1Q9P218 RNU6-674P-201ENST00000363831 107 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 Y_RNA.257-201ENST00000364596 102 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 Y_RNA.292-201ENST00000364904 97 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 RNY4P28-201ENST00000365281 93 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.03□□□□□ -2.08
COL20A1Q9P218 Y_RNA.714-201ENST00000517065 90 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 AC011921.3-201ENST00000605540 361 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
COL20A1Q9P218 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL20A1Q9P218 Y_RNA.203-201ENST00000364106 102 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 Y_RNA.304-201ENST00000365011 112 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 RNU6-651P-201ENST00000411040 105 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.02□□□□□ -2.09
COL20A1Q9P218 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
COL20A1Q9P218 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 AC078938.1-201ENST00000620993 318 ntBASIC2.02□□□□□ -2.09
COL20A1Q9P218 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL20A1Q9P218 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
COL20A1Q9P218 MIR367-201ENST00000362299 68 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 RNU6-1318P-201ENST00000365389 103 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 RNU6-1080P-201ENST00000383982 107 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 RNU7-34P-201ENST00000459394 64 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.01□□□□□ -2.09
COL20A1Q9P218 MIR4724-201ENST00000579485 89 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 AL929325.1-201ENST00000603096 117 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 JPX_2.1-201ENST00000614161 69 ntBASIC2.01□□□□□ -2.09
COL20A1Q9P218 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
COL20A1Q9P218 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 RNU6-414P-201ENST00000363705 104 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 Y_RNA.262-201ENST00000364641 102 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 SNORA4.2-201ENST00000365313 147 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 SNORA8.3-201ENST00000384679 139 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 RNU6-1031P-201ENST00000384773 107 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 MIR526A2-201ENST00000390198 65 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2□□□□□ -2.09
COL20A1Q9P218 AC108059.2-201ENST00000434626 151 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 STAG3L5P-204ENST00000443759 179 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 HMGN1P7-201ENST00000491722 313 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 MRPS17P9-201ENST00000511924 393 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 SNORD116-28-201ENST00000516123 91 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 SNORA31.10-201ENST00000516482 106 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 RNU6-1007P-201ENST00000516586 107 ntBASIC2□□□□□ -2.09
COL20A1Q9P218 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
COL20A1Q9P218 Y_RNA.200-201ENST00000364018 102 ntBASIC1.99□□□□□ -2.09
COL20A1Q9P218 MIR1298-201ENST00000408783 112 ntBASIC1.99□□□□□ -2.09
COL20A1Q9P218 RPL30P13-201ENST00000418873 348 ntBASIC1.99□□□□□ -2.09
COL20A1Q9P218 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
COL20A1Q9P218 Y_RNA.140-201ENST00000363474 103 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 RNU4-41P-201ENST00000364426 143 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL20A1Q9P218 AC108667.1-201ENST00000428618 249 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 AC023449.1-201ENST00000454464 154 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 Y_RNA.700-201ENST00000516806 100 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 AC100767.1-201ENST00000528178 123 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.98□□□□□ -2.09
COL20A1Q9P218 MIR4419B-201ENST00000577260 68 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 MIR4255-201ENST00000579351 72 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 AP000942.3-201ENST00000603702 160 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 AL365265.1-201ENST00000621045 234 ntBASIC1.98□□□□□ -2.09
COL20A1Q9P218 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL20A1Q9P218 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL20A1Q9P218 Y_RNA.199-201ENST00000364014 102 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 Y_RNA.253-201ENST00000364562 112 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 RNU6-200P-201ENST00000364743 107 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL20A1Q9P218 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL20A1Q9P218 RNA5SP496-201ENST00000391240 109 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 Y_RNA.626-201ENST00000411288 95 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms