Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 MIR1283-2-201ENST00000408621 87 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 MRPS17P9-201ENST00000511924 393 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 AC084364.2-201ENST00000546924 395 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 AL160236.1-201ENST00000556317 195 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 SNORD14A-201ENST00000606526 91 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 RNU6-1082P-201ENST00000364574 107 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 RNU6-81P-201ENST00000365608 104 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 RNU6-597P-201ENST00000365620 102 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 SNORD72-201ENST00000390994 80 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 Y_RNA.586-201ENST00000391146 98 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 SNORA75.5-201ENST00000391291 81 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 RNU6-257P-201ENST00000410238 98 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 MIR4662B-201ENST00000579498 81 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 CTSLP2-204ENST00000629029 392 ntBASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KCMF1Q9P0J7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
KCMF1Q9P0J7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KCMF1Q9P0J7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 RNU6-978P-201ENST00000364371 103 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 Y_RNA.420-201ENST00000384043 110 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 MIR522-201ENST00000385071 87 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 SNORA26-201ENST00000391286 122 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP270-201ENST00000411361 118 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KCMF1Q9P0J7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNY1P11-201ENST00000363759 113 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 SNORA25.7-201ENST00000364375 127 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 SNORD113-1-201ENST00000365321 69 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 SNORA40-201ENST00000388090 126 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNU6-460P-201ENST00000391158 108 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP465-201ENST00000391195 109 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP508-201ENST00000411327 119 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 AC245047.4-201ENST00000433189 144 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 AC092991.1-201ENST00000477176 376 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNVU1-2-201ENST00000516326 135 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNU6-126P-201ENST00000516685 103 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 RNU6-365P-201ENST00000517113 106 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 AC090142.3-201ENST00000519012 385 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 MIR4435-1-201ENST00000582552 80 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 AC008507.4-201ENST00000585464 127 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 AC097639.2-201ENST00000603159 172 ntBASIC2.32□□□□□ -2.04
KCMF1Q9P0J7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 FTH1P12-201ENST00000432137 551 ntBASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 RNU7-197P-201ENST00000458836 62 ntBASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 MIR8054-201ENST00000620877 86 ntBASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP126-201ENST00000365092 109 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 Y_RNA.542-201ENST00000384641 111 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 SNORA67.4-201ENST00000384688 142 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 RNU6-440P-201ENST00000390882 105 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 MTND4LP9-201ENST00000427694 174 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 STAG3L5P-204ENST00000443759 179 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 AC091544.4-201ENST00000555268 342 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 AC087685.1-201ENST00000587507 141 ntBASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.3□□□□□ -2.04
KCMF1Q9P0J7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RNU1-52P-201ENST00000384190 164 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RNU6-959P-201ENST00000384671 107 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP482-201ENST00000391269 118 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RN7SL429P-201ENST00000479090 223 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RN7SL489P-201ENST00000486185 223 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RN7SL327P-201ENST00000488659 223 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 RN7SL853P-201ENST00000617250 223 ntBASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
KCMF1Q9P0J7 Y_RNA.66-201ENST00000362862 102 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 SNORA3A-201ENST00000364113 130 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms