Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC005972.2-201ENST00000604690 348 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 AC010205.1-201ENST00000616668 449 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 SNORD68-201ENST00000363214 84 ntBASIC0.72□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.146-201ENST00000363549 102 ntBASIC0.72□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.253-201ENST00000364562 112 ntBASIC0.72□□□□□ -2.29
HOXC10Q9NYD6 MIR559-201ENST00000385188 96 ntBASIC0.72□□□□□ -2.29
HOXC10Q9NYD6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.72□□□□□ -2.29
HOXC10Q9NYD6 PRDX4P1-201ENST00000507189 574 ntBASIC0.72□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.172-201ENST00000363765 102 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RNU6-1323P-201ENST00000384025 107 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 MIR136-201ENST00000385207 82 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RNU6-876P-201ENST00000391295 104 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RNA5SP193-201ENST00000410353 107 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RNU6-710P-201ENST00000410424 105 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 PIGPP3-201ENST00000425307 415 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RPS20P10-201ENST00000451209 253 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 MTCO3P10-201ENST00000455912 772 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.653-201ENST00000459091 95 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 MIR4659A-201ENST00000580269 81 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 AC133104.2-201ENST00000615272 193 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 AC007742.2-201ENST00000618226 398 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 U2.1-201ENST00000618978 145 ntBASIC0.71□□□□□ -2.3
HOXC10Q9NYD6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 RNU6-926P-201ENST00000384075 107 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.619-201ENST00000410951 90 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 AC138393.2-201ENST00000414742 246 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 RPEP5-201ENST00000441137 268 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 HMGN2P32-201ENST00000444648 269 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 RNU6-966P-201ENST00000516479 104 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 RNU7-43P-201ENST00000516554 64 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 RNU11-2P-201ENST00000516898 142 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 RN7SKP295-201ENST00000517264 153 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 AL355073.2-201ENST00000612106 557 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 AC091925.1-201ENST00000623204 462 ntBASIC0.7□□□□□ -2.3
HOXC10Q9NYD6 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.462-201ENST00000384268 102 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.570-201ENST00000384750 101 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.605-201ENST00000410577 105 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 MCFD2P1-201ENST00000417812 300 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 FABP5P4-201ENST00000437203 171 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 RBMX2P4-201ENST00000441256 376 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 RNU7-152P-201ENST00000458982 64 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 RNA5SP121-201ENST00000516537 101 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 SNORD45.4-201ENST00000516629 73 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 VN1R91P-201ENST00000594377 169 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 SEPT14P17-201ENST00000617978 177 ntBASIC0.69□□□□□ -2.3
HOXC10Q9NYD6 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNA5SP325-201ENST00000363756 130 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.310-201ENST00000365063 113 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.368-201ENST00000365547 113 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.387-201ENST00000383918 102 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNU6-1297P-201ENST00000384415 104 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 AL390729.2-201ENST00000416137 156 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 AC098614.3-201ENST00000438957 440 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RN7SKP164-201ENST00000516138 266 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNU6-559P-201ENST00000516151 98 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNU6-277P-201ENST00000516272 106 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNU6-155P-201ENST00000516347 100 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNU7-116P-201ENST00000516940 62 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.714-201ENST00000517065 90 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 AC087685.1-201ENST00000587507 141 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 U6.92-201ENST00000636464 89 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 AC010487.4-201ENST00000637027 61 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 AC099654.14-201ENST00000638599 341 ntBASIC0.68□□□□□ -2.3
HOXC10Q9NYD6 RNA5SP48-201ENST00000363969 126 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 snoU2-30.1-201ENST00000365012 70 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.621-201ENST00000411065 96 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 RNU6-830P-201ENST00000516353 107 ntBASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.67□□□□□ -2.3
HOXC10Q9NYD6 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 RNU6-1040P-201ENST00000383974 107 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 Y_RNA.456-201ENST00000384232 111 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 SNORD116-29-201ENST00000384516 83 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 AC005534.2-201ENST00000431047 433 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 AC005042.3-201ENST00000453230 174 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 RPL30P15-201ENST00000457129 321 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 FGF7P4-201ENST00000509595 295 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 RNU6-496P-201ENST00000516145 99 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 MIR1273G-201ENST00000577677 100 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 MIR4764-201ENST00000580680 88 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 AC122108.2-201ENST00000611946 526 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 AL589743.1-201ENST00000551932 2712 ntBASIC0.66□□□□□ -2.3
HOXC10Q9NYD6 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 SNORD50B-201ENST00000364995 70 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.329-201ENST00000365209 107 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 RNY4P36-201ENST00000391116 96 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms