| DNAH9 | Q9NYC9 | Y_RNA.502-201 | ENST00000384478 | 113 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | Y_RNA.539-201 | ENST00000384635 | 107 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | MTCO2P11-201 | ENST00000431069 | 680 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | MTND1P32-201 | ENST00000433043 | 938 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | SNAP23P1-201 | ENST00000433229 | 246 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | USP9YP12-201 | ENST00000450481 | 570 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | RNU7-188P-201 | ENST00000517063 | 64 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | RNU7-161P-201 | ENST00000517289 | 62 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | SLC2A13P1-201 | ENST00000531560 | 322 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | MIR217-201 | ENST00000384817 | 110 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | RNU6ATAC42P-201 | ENST00000408637 | 95 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | RNU6-1001P-201 | ENST00000411265 | 100 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | MTND4P18-201 | ENST00000447010 | 465 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | AC130371.1-204 | ENST00000576197 | 401 nt | TSL 3 BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | AC012409.4-201 | ENST00000612923 | 249 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | Y_RNA.582-201 | ENST00000391023 | 95 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | NDUFAF4P4-201 | ENST00000454883 | 502 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | MTCO2P6-201 | ENST00000463134 | 685 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | AL049777.1-201 | ENST00000622740 | 518 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | Y_RNA.38-201 | ENST00000362617 | 102 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | SNORD115-25-201 | ENST00000362619 | 82 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | RNU6-329P-201 | ENST00000459618 | 107 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | SERF1AP1-201 | ENST00000514575 | 187 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | Y_RNA.714-201 | ENST00000517065 | 90 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | MTND5P34-201 | ENST00000568888 | 325 nt | BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | AC079466.2-201 | ENST00000585394 | 185 nt | TSL 5 BASIC | -1.09 | □□□□□ -2.58 | | |
| DNAH9 | Q9NYC9 | RNU5F-3P-201 | ENST00000363767 | 117 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | Y_RNA.426-201 | ENST00000384068 | 113 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU4-61P-201 | ENST00000411243 | 107 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC073464.1-201 | ENST00000429823 | 534 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU7-104P-201 | ENST00000459398 | 79 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC026414.1-201 | ENST00000504046 | 698 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MTCO1P31-201 | ENST00000506355 | 492 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR4293-201 | ENST00000584305 | 78 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC174048.1-201 | ENST00000603389 | 144 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AL391834.2-201 | ENST00000609982 | 546 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | HOTAIRM1_5.1-201 | ENST00000619311 | 145 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-1178P-201 | ENST00000516674 | 107 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | DEFB108A-201 | ENST00000530110 | 222 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR30D-201 | ENST00000362283 | 70 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-227P-201 | ENST00000362865 | 103 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-1125P-201 | ENST00000363601 | 107 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | Y_RNA.577-201 | ENST00000384794 | 101 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AL031667.1-201 | ENST00000440222 | 725 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC017015.2-201 | ENST00000497946 | 376 nt | TSL 2 BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR3146-201 | ENST00000580367 | 79 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR4491-201 | ENST00000581087 | 68 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC005776.1-201 | ENST00000603164 | 290 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | Y_RNA.802-201 | ENST00000614892 | 130 nt | BASIC | -1.1 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | SNORD18.1-201 | ENST00000363807 | 70 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-1036P-201 | ENST00000383959 | 104 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-540P-201 | ENST00000384622 | 101 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU2-9P-201 | ENST00000410194 | 145 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RPL30P15-201 | ENST00000457129 | 321 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | LINC01491-201 | ENST00000558434 | 505 nt | TSL 3 BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | POLR3GP1-201 | ENST00000594073 | 261 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR6082-201 | ENST00000613604 | 109 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | NFIA-AS1-206 | ENST00000630199 | 220 nt | TSL 5 BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | DEFB131A-201 | ENST00000334879 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNA5SP245-201 | ENST00000364239 | 121 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | EPS15P1-201 | ENST00000448836 | 336 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MIR320B2-201 | ENST00000408479 | 138 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU7-136P-201 | ENST00000458819 | 69 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC139792.3-201 | ENST00000623525 | 224 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-865P-201 | ENST00000364772 | 107 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-946P-201 | ENST00000383878 | 107 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MT-TM-201 | ENST00000387377 | 68 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC004866.1-201 | ENST00000411748 | 78 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RPL30P16-201 | ENST00000419341 | 429 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNA5SP484-201 | ENST00000458857 | 111 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC117522.1-201 | ENST00000509821 | 380 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-583P-201 | ENST00000516012 | 92 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-1121P-201 | ENST00000516802 | 109 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | MTND3P13-201 | ENST00000574391 | 343 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AP002371.2-201 | ENST00000624450 | 503 nt | BASIC | -1.11 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-228P-201 | ENST00000362700 | 106 nt | BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AL049829.1-201 | ENST00000465411 | 156 nt | BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC023158.2-201 | ENST00000614876 | 543 nt | BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AL158050.1-201 | ENST00000416077 | 457 nt | BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC092625.1-201 | ENST00000442706 | 393 nt | TSL 3 BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | snoU13.13-201 | ENST00000458842 | 104 nt | BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | Z94722.1-201 | ENST00000604328 | 474 nt | BASIC | -1.12 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | SNORD114-17-201 | ENST00000364699 | 75 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-740P-201 | ENST00000364734 | 105 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU2-39P-201 | ENST00000410604 | 198 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC008873.1-201 | ENST00000625051 | 138 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AC103706.2-201 | ENST00000638080 | 240 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AL354994.1-201 | ENST00000445967 | 194 nt | TSL 5 BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | ADI1P3-201 | ENST00000549509 | 470 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | SMAD5-AS1_4.1-201 | ENST00000615561 | 167 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | U6.114-201 | ENST00000636407 | 96 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | Y_RNA.284-201 | ENST00000364806 | 102 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| DNAH9 | Q9NYC9 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | -1.13 | □□□□□ -2.59 | | |