Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR548AY-201ENST00000617669 107 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 U6.104-201ENST00000637979 90 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.54-201ENST00000362766 105 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RNU6-463P-201ENST00000384340 107 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RNU6-1289P-201ENST00000384431 106 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.39□□□□□ -2.19
NDE1Q9NXR1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RPL36AP21-201ENST00000490372 323 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RPL23AP54-201ENST00000495129 419 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RNU7-115P-201ENST00000516433 55 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.680-201ENST00000516441 93 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 RNA5SP481-201ENST00000516814 122 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 AL008718.3-201ENST00000610217 321 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 U4.1-201ENST00000620349 87 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.39□□□□□ -2.19
NDE1Q9NXR1 AC100821.1-201ENST00000523153 2479 ntBASIC1.39□□□□□ -2.19
NDE1Q9NXR1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AL603910.2-201ENST00000407268 136 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 MIR1278-201ENST00000408753 81 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
NDE1Q9NXR1 CYCSP49-201ENST00000420810 319 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AC005908.1-201ENST00000468701 347 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AC005357.1-201ENST00000588399 301 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AP003357.1-201ENST00000604497 148 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 AC021506.2-201ENST00000612354 169 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 MIR7111-201ENST00000619751 72 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 snoU18.1-201ENST00000629629 71 ntBASIC1.38□□□□□ -2.19
NDE1Q9NXR1 MIR335-201ENST00000362173 94 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.14-201ENST00000362415 103 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 SNORD27-201ENST00000363981 72 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 RNU4-41P-201ENST00000364426 143 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 RNU6-702P-201ENST00000364982 107 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.452-201ENST00000384202 108 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.37□□□□□ -2.19
NDE1Q9NXR1 HSPE1P24-201ENST00000450782 238 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 MTND4LP30-201ENST00000454092 297 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 AL049830.1-201ENST00000468034 425 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 MTND1P19-201ENST00000511780 315 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 AP002004.2-201ENST00000531656 154 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 AC127455.1-201ENST00000565496 145 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 MIR4643-201ENST00000577473 78 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 AL591926.4-201ENST00000616895 298 ntBASIC1.37□□□□□ -2.19
NDE1Q9NXR1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.37□□□□□ -2.19
NDE1Q9NXR1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NDE1Q9NXR1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.37□□□□□ -2.19
NDE1Q9NXR1 UBE2WP1-201ENST00000362030 340 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 SNORD68-201ENST00000363214 84 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 RNU4-10P-201ENST00000364383 140 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.307-201ENST00000365022 117 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 SNORA72-201ENST00000384339 132 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.556-201ENST00000384677 113 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
NDE1Q9NXR1 RNU6-360P-201ENST00000390944 104 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 SNORA36B-201ENST00000410438 131 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 RN7SKP200-201ENST00000410564 320 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 CALM2P4-201ENST00000430810 426 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 Z98949.2-201ENST00000440996 144 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.36□□□□□ -2.19
NDE1Q9NXR1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 AC062037.2-201ENST00000610137 73 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
NDE1Q9NXR1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NDE1Q9NXR1 MIR424-201ENST00000362227 98 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 RNU6-899P-201ENST00000363947 107 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 RNU6-211P-201ENST00000384047 107 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 RNU11-5P-201ENST00000391216 129 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 MLLT10P1-201ENST00000418346 262 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 RPL30P13-201ENST00000418873 348 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
NDE1Q9NXR1 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
NDE1Q9NXR1 RPL39P38-201ENST00000467018 153 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 OR9P1P-201ENST00000496431 281 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms