Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 MIR616-201ENST00000385293 97 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MKS1Q9NXB0 RNU6-131P-201ENST00000391144 107 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.14□□□□□ -2.07
MKS1Q9NXB0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.14□□□□□ -2.07
MKS1Q9NXB0 SCARNA8-201ENST00000515924 131 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 uc_338.20-201ENST00000621563 178 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MKS1Q9NXB0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
MKS1Q9NXB0 MIRLET7C-201ENST00000362160 84 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 RNU6-47P-201ENST00000383866 107 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 RNU6-439P-201ENST00000384188 106 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 RNU6-918P-201ENST00000391219 106 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 RNU2-40P-201ENST00000410833 196 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 RNA5SP168-201ENST00000516642 112 ntBASIC2.13□□□□□ -2.07
MKS1Q9NXB0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
MKS1Q9NXB0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.12□□□□□ -2.07
MKS1Q9NXB0 RNU6-414P-201ENST00000363705 104 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 RNU6-424P-201ENST00000384367 105 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 RPL30P13-201ENST00000418873 348 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 CALM2P4-201ENST00000430810 426 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 AC023449.1-201ENST00000454464 154 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 AC245047.8-201ENST00000456455 284 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 RNU6-453P-201ENST00000516819 85 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 MIR3668-201ENST00000582138 75 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 MIR4672-201ENST00000583126 81 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 AL049861.1-201ENST00000603130 150 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 AL391903.3-201ENST00000612158 163 ntBASIC2.12□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.7-201ENST00000362352 102 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 RNU6-103P-201ENST00000363686 107 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.238-201ENST00000364441 102 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 RNU6-203P-201ENST00000384038 104 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 MT-TT-201ENST00000387460 66 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 U8.16-201ENST00000391279 133 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 MTND5P15-201ENST00000434246 349 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 SNORA81.3-201ENST00000517283 198 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 AC087685.1-201ENST00000587507 141 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 uc_338.4-201ENST00000616635 176 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 AL513423.1-201ENST00000621695 132 ntBASIC2.11□□□□□ -2.07
MKS1Q9NXB0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MKS1Q9NXB0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MKS1Q9NXB0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
MKS1Q9NXB0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.571-201ENST00000384753 98 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 RNU2-2P-201ENST00000410396 191 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 RN7SKP192-201ENST00000411291 327 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 JTBP1-201ENST00000441314 247 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 AC120024.3-201ENST00000603167 156 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 RNU2-4P-201ENST00000606190 192 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 AC103810.8-201ENST00000607347 118 ntBASIC2.1□□□□□ -2.07
MKS1Q9NXB0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.1□□□□□ -2.07
MKS1Q9NXB0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
MKS1Q9NXB0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
MKS1Q9NXB0 WWP1P1-201ENST00000466609 2769 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 RNY3P5-201ENST00000384127 102 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 AL606845.1-201ENST00000404881 255 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 PGBD4P5-201ENST00000445958 426 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.09□□□□□ -2.07
MKS1Q9NXB0 CYCTP-201ENST00000504253 315 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 RNA5SP281-201ENST00000516504 135 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 AC095038.3-201ENST00000634439 195 ntBASIC2.09□□□□□ -2.07
MKS1Q9NXB0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 SNORD50B-201ENST00000364995 70 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 RNU6-163P-201ENST00000384396 106 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 RNU4-70P-201ENST00000384579 139 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 MIR194-1-201ENST00000384892 85 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
MKS1Q9NXB0 SNORD77.4-201ENST00000516158 81 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 SNORD45.4-201ENST00000516629 73 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 AP002392.1-201ENST00000537692 208 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.08□□□□□ -2.08
MKS1Q9NXB0 MIR4744-201ENST00000581563 82 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 AC008507.4-201ENST00000585464 127 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
MKS1Q9NXB0 AC027279.3-201ENST00000625055 122 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms