Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
HPF1Q9NWY4 AC104695.3-201ENST00000604052 296 ntBASIC0.44□□□□□ -2.34
HPF1Q9NWY4 AC007742.2-201ENST00000618226 398 ntBASIC0.44□□□□□ -2.34
HPF1Q9NWY4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.101-201ENST00000363154 102 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.172-201ENST00000363765 102 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 SNORD115-47-201ENST00000391226 86 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 MIR1302-7-201ENST00000408841 72 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 RNA5SP95-201ENST00000410319 137 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 MTND3P8-201ENST00000412909 339 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 AC116353.2-201ENST00000505332 712 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.43□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.86-201ENST00000363020 111 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.148-201ENST00000363557 117 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 SNORA75.4-201ENST00000391278 119 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.42□□□□□ -2.34
HPF1Q9NWY4 RN7SL793P-201ENST00000583259 296 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 AC012433.1-201ENST00000588916 398 ntBASIC0.42□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.41□□□□□ -2.34
HPF1Q9NWY4 MIR802-201ENST00000390235 94 ntBASIC0.41□□□□□ -2.34
HPF1Q9NWY4 RNU6-192P-201ENST00000391253 100 ntBASIC0.41□□□□□ -2.34
HPF1Q9NWY4 AC011352.1-201ENST00000512300 793 ntBASIC0.41□□□□□ -2.34
HPF1Q9NWY4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.41□□□□□ -2.34
HPF1Q9NWY4 AC011712.1-201ENST00000588959 234 ntBASIC0.41□□□□□ -2.34
HPF1Q9NWY4 Y_RNA.88-201ENST00000363029 99 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 RNU6-396P-201ENST00000365369 105 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.436-201ENST00000384097 102 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 SNORD28B-201ENST00000390993 75 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.592-201ENST00000410274 109 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 RNU6-720P-201ENST00000516363 108 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 MIR548AR-201ENST00000582191 57 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 SNORD114-23-201ENST00000363536 72 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.339-201ENST00000365325 102 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.446-201ENST00000384178 104 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.577-201ENST00000384794 101 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 SNORD78.2-201ENST00000391076 69 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 AC092989.1-201ENST00000481235 277 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 AC093534.1-201ENST00000504977 132 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 AL355375.2-201ENST00000574825 175 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 AC087685.1-201ENST00000587507 141 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
HPF1Q9NWY4 RNU6-623P-201ENST00000363143 105 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 RNU6-442P-201ENST00000383968 104 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 RNY1P4-201ENST00000384595 115 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 MIR573-201ENST00000384964 99 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 RNU6-855P-201ENST00000410395 104 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 RNU6-710P-201ENST00000410424 105 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 PRDX4P1-201ENST00000507189 574 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 RNU6-1012P-201ENST00000516606 109 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 RNU6-264P-201ENST00000517134 104 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
HPF1Q9NWY4 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 JPX_2.1-201ENST00000614161 69 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.3-201ENST00000362331 103 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 RNU6-20P-201ENST00000384106 107 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 RNY3P4-201ENST00000384428 101 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.37□□□□□ -2.35
HPF1Q9NWY4 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 RNU6-436P-201ENST00000516171 114 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 RNA5SP480-201ENST00000516840 109 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 RNU7-116P-201ENST00000516940 62 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 AC087588.2-201ENST00000617667 426 ntBASIC0.37□□□□□ -2.35
HPF1Q9NWY4 RNU4-45P-201ENST00000365469 141 ntBASIC0.36□□□□□ -2.35
HPF1Q9NWY4 SNORA51.10-201ENST00000384418 136 ntBASIC0.36□□□□□ -2.35
HPF1Q9NWY4 RNU6-1156P-201ENST00000410365 100 ntBASIC0.36□□□□□ -2.35
HPF1Q9NWY4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
HPF1Q9NWY4 RNU7-4P-201ENST00000516961 62 ntBASIC0.36□□□□□ -2.35
HPF1Q9NWY4 AC090517.2-201ENST00000614966 680 ntBASIC0.36□□□□□ -2.35
HPF1Q9NWY4 AL669831.3-213ENST00000636676 183 ntBASIC0.36□□□□□ -2.35
HPF1Q9NWY4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.35□□□□□ -2.35
HPF1Q9NWY4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 RNU6-1323P-201ENST00000384025 107 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 RNU6-767P-201ENST00000384132 107 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.516-201ENST00000384541 124 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 MIR570-201ENST00000384917 97 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 MIR1277-201ENST00000408536 78 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 RNU6-1199P-201ENST00000411249 104 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.35□□□□□ -2.35
HPF1Q9NWY4 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.35□□□□□ -2.35
HPF1Q9NWY4 AC144568.1-201ENST00000520139 137 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 AC060780.3-201ENST00000589464 80 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 Pinc.1-201ENST00000616452 154 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 AC015726.2-201ENST00000620112 122 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms