Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 RNU1-23P-201ENST00000363361 144 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 SNORD14E-201ENST00000364009 85 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 SNORD45B-201ENST00000364617 72 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.313-201ENST00000365095 103 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-35-201ENST00000365122 82 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 AC123900.1-201ENST00000420390 96 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 SNORD36C-201ENST00000516733 66 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-579P-201ENST00000516879 102 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 MIR4425-201ENST00000580572 84 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 MIR6852-201ENST00000621699 66 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 AC091932.4-201ENST00000623386 200 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 MIR1248-201ENST00000629190 106 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-13-201ENST00000363358 82 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-16-201ENST00000363887 82 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-743P-201ENST00000364151 106 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-1-201ENST00000364961 82 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-788P-201ENST00000390967 104 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 AL627390.1-201ENST00000396055 340 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 RNA5SP120-201ENST00000410900 112 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 RPL32P35-201ENST00000415214 394 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 RPS23P4-201ENST00000487908 423 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 SNORA18.7-201ENST00000516910 131 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 AP003484.1-201ENST00000530974 250 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 MIR4762-201ENST00000585261 75 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 MIR203B-201ENST00000636080 86 ntBASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CUEDC1Q9NWM3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CUEDC1Q9NWM3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CUEDC1Q9NWM3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CUEDC1Q9NWM3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 RNU4-67P-201ENST00000364569 141 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-219P-201ENST00000364728 107 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.377-201ENST00000365644 108 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 MIR128-1-201ENST00000384921 82 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 BTF3P4-201ENST00000418852 495 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AC060773.1-201ENST00000421698 310 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 CYCSP4-201ENST00000429682 331 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 SNRPGP14-201ENST00000435400 219 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AC093259.1-201ENST00000509755 300 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.705-201ENST00000516862 110 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AP002004.2-201ENST00000531656 154 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AC078899.2-201ENST00000595282 212 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 MIR7851-201ENST00000610611 160 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 MIR8057-201ENST00000620957 69 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 AP003355.3-201ENST00000623465 114 ntBASIC3.4□□□□□ -1.87
CUEDC1Q9NWM3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 AC093010.3-201ENST00000570269 15214 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-268P-201ENST00000364174 107 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-776P-201ENST00000364403 104 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.267-201ENST00000364679 109 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.299-201ENST00000364973 94 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-1022P-201ENST00000365049 104 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.332-201ENST00000365271 113 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 AL049830.1-201ENST00000468034 425 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 UBE2DNL-203ENST00000474922 222 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-1018P-201ENST00000516577 106 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 MIR4777-201ENST00000583710 86 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 U4atac.1-201ENST00000618345 95 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CUEDC1Q9NWM3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 RNU1-33P-201ENST00000364249 162 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 U8.5-201ENST00000364528 136 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-887P-201ENST00000410660 100 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 AL035398.1-201ENST00000430869 322 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 AC115115.1-201ENST00000449927 248 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 RNU7-94P-201ENST00000459576 63 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 RN7SL594P-201ENST00000470590 287 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 AC025518.1-201ENST00000479856 347 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.95-201ENST00000363079 95 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 snoU2-30.1-201ENST00000365012 70 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 RNA5SP144-201ENST00000410846 116 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 AL022718.1-201ENST00000412004 84 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 AC107083.1-201ENST00000439643 279 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 AC022149.2-201ENST00000621061 203 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 MIR1255B1-201ENST00000636325 63 ntBASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CUEDC1Q9NWM3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms