Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR4778-201ENST00000577635 80 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 AL513534.2-201ENST00000603836 250 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 RNU4-80P-201ENST00000363200 141 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 MIR653-201ENST00000385279 96 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 RNU6-985P-201ENST00000410182 104 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 AL390729.2-201ENST00000416137 156 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 AL049830.1-201ENST00000468034 425 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 HMGN1P10-201ENST00000474557 553 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 MIR6078-201ENST00000611069 100 ntBASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.56□□□□□ -2.16
SMC4Q9NTJ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 MIRLET7C-201ENST00000362160 84 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 RNU6-770P-201ENST00000363929 105 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 RNU2-14P-201ENST00000411053 191 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 AC093850.1-201ENST00000454121 251 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 AC092991.1-201ENST00000477176 376 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 SEPT14P8-201ENST00000508026 178 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 RNY3P15-201ENST00000516297 97 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 RNU6-764P-201ENST00000516396 105 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 CYP3A52P-201ENST00000563326 91 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 SNORD113-5-201ENST00000607261 78 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 AC106754.2-201ENST00000623006 233 ntBASIC1.55□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.19-201ENST00000362462 99 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 RNU6-199P-201ENST00000362954 107 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 AC015922.2-201ENST00000435593 184 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 MTND5P22-201ENST00000458380 195 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 AC011604.1-201ENST00000545978 196 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 AC005972.2-201ENST00000604690 348 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 AC068647.2-201ENST00000637380 353 ntBASIC1.54□□□□□ -2.16
SMC4Q9NTJ3 RNU6-801P-201ENST00000364087 105 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 U8.7-201ENST00000364940 136 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 MIR1276-201ENST00000408707 83 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 POLR2KP2-201ENST00000438155 177 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 AL355297.3-201ENST00000604082 446 ntBASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.53□□□□□ -2.16
SMC4Q9NTJ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 MIR26B-201ENST00000362251 77 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 RNU6-639P-201ENST00000384074 107 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 MTATP8P1-201ENST00000467115 207 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 AC117454.1-201ENST00000491120 168 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 RN7SKP88-201ENST00000516847 250 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 AC090049.2-201ENST00000550377 109 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 7SK.8-201ENST00000612110 250 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 MIR6504-201ENST00000613520 61 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 7SK.11-201ENST00000615477 250 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 AL591926.4-201ENST00000616895 298 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 MIR8065-201ENST00000620577 100 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 7SK.13-201ENST00000622040 250 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 AC134026.1-201ENST00000623249 2239 ntBASIC1.52□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 MRPS35P2-201ENST00000508242 191 ntBASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 RNU6-191P-201ENST00000516295 94 ntBASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 SNORA40.15-201ENST00000516884 107 ntBASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
SMC4Q9NTJ3 SNORA2.2-201ENST00000365473 135 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 AC117470.1-201ENST00000381974 330 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 SNORA26.5-201ENST00000391215 123 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 RNU6-710P-201ENST00000410424 105 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 snoU13.18-201ENST00000459483 104 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 AC024405.2-202ENST00000532731 184 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 AC027279.3-201ENST00000625055 122 ntBASIC1.5□□□□□ -2.17
SMC4Q9NTJ3 SNORD68-201ENST00000363214 84 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.569-201ENST00000384749 103 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 PIGPP3-201ENST00000425307 415 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 MTCO1P5-201ENST00000433573 344 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 AC104332.1-201ENST00000440471 797 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 U8.19-201ENST00000459095 133 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 HMGN1P7-201ENST00000491722 313 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 RNU7-12P-201ENST00000516030 62 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms