Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC245166.1-201ENST00000521012 253 ntBASIC2.62□□□□□ -1.99
GCM1Q9NP62 MIR3200-201ENST00000580767 85 ntBASIC2.62□□□□□ -1.99
GCM1Q9NP62 MALAT1.1-201ENST00000618249 95 ntBASIC2.62□□□□□ -1.99
GCM1Q9NP62 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.62□□□□□ -1.99
GCM1Q9NP62 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
GCM1Q9NP62 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GCM1Q9NP62 SNORD115-28-201ENST00000363931 81 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 Y_RNA.344-201ENST00000365381 112 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 RNU6-442P-201ENST00000383968 104 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 MIR548D2-201ENST00000384955 97 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 SNORA26.7-201ENST00000391288 122 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.61□□□□□ -1.99
GCM1Q9NP62 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 RNU7-164P-201ENST00000459221 62 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 AP002004.2-201ENST00000531656 154 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 MIR1245B-201ENST00000636115 69 ntBASIC2.61□□□□□ -1.99
GCM1Q9NP62 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GCM1Q9NP62 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
GCM1Q9NP62 Y_RNA.37-201ENST00000362606 108 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 Y_RNA.93-201ENST00000363066 109 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 RNU1-23P-201ENST00000363361 144 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 Y_RNA.265-201ENST00000364677 108 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 RNU1-133P-201ENST00000364867 167 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 SNORD67-201ENST00000390833 111 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 AL353689.1-201ENST00000438895 199 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 AC008885.1-201ENST00000514930 301 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 RNU6-1041P-201ENST00000516254 102 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 RNU7-25P-201ENST00000516544 62 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 SNORA48.11-201ENST00000517015 89 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 MIR3163-201ENST00000581592 73 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 MIR338-201ENST00000636369 67 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 U6.108-201ENST00000637764 58 ntBASIC2.6□□□□□ -1.99
GCM1Q9NP62 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GCM1Q9NP62 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GCM1Q9NP62 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
GCM1Q9NP62 MIR22-201ENST00000362190 85 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 MIR422A-201ENST00000362286 90 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 SNORA1B-201ENST00000362535 133 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 SNORD14E-201ENST00000364009 85 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 SNORA63D-201ENST00000364359 132 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 RNU6-573P-201ENST00000383938 106 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.59□□□□□ -1.99
GCM1Q9NP62 RNU1-131P-201ENST00000458943 161 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 RNU7-94P-201ENST00000459576 63 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 AC107297.1-201ENST00000459991 176 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 SNORA74D-201ENST00000516404 141 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 Y_RNA.685-201ENST00000516532 108 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 AC007536.1-201ENST00000533382 349 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 AL353149.1-201ENST00000610667 244 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 AL162726.3-218ENST00000636401 95 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.59□□□□□ -1.99
GCM1Q9NP62 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.59□□□□□ -2
GCM1Q9NP62 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
GCM1Q9NP62 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.59□□□□□ -2
GCM1Q9NP62 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
GCM1Q9NP62 Y_RNA.107-201ENST00000363190 121 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 U8.9-201ENST00000365667 134 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 Y_RNA.547-201ENST00000384654 119 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 RNA5SP323-201ENST00000391094 133 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 RNU2-48P-201ENST00000410694 191 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
GCM1Q9NP62 RPL39P25-201ENST00000449384 154 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 RNU7-123P-201ENST00000515911 60 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 MIR4778-201ENST00000577635 80 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 MIR4325-201ENST00000583049 90 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 MIR4305-201ENST00000583252 102 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 MIR4762-201ENST00000585261 75 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 AL162274.2-201ENST00000614406 332 ntBASIC2.58□□□□□ -2
GCM1Q9NP62 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
GCM1Q9NP62 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.58□□□□□ -2
GCM1Q9NP62 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.58□□□□□ -2
GCM1Q9NP62 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.57□□□□□ -2
GCM1Q9NP62 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.57□□□□□ -2
GCM1Q9NP62 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.57□□□□□ -2
GCM1Q9NP62 RNU6-1084P-201ENST00000362498 107 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 SNORD68-201ENST00000363214 84 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 SNORA71.1-201ENST00000364523 117 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 snoU2-30.1-201ENST00000365012 70 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 Y_RNA.342-201ENST00000365352 113 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 Y_RNA.440-201ENST00000384120 114 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 SNORA54-201ENST00000384281 123 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 RNU6-1152P-201ENST00000384576 107 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 RNU6-1104P-201ENST00000384723 104 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 MIR887-201ENST00000401258 79 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 MIR1912-201ENST00000410389 80 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 AL445646.1-201ENST00000431784 216 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 AC009238.1-201ENST00000442165 424 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 AC009237.6-201ENST00000446969 424 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 RNU7-80P-201ENST00000459562 61 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 RNA5SP341-201ENST00000516261 117 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 MIR3683-201ENST00000580847 82 ntBASIC2.57□□□□□ -2
GCM1Q9NP62 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.57□□□□□ -2
GCM1Q9NP62 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
GCM1Q9NP62 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
GCM1Q9NP62 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.56□□□□□ -2
GCM1Q9NP62 RNU6-268P-201ENST00000364174 107 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 RNU4-36P-201ENST00000364294 144 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms