Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 SNORD61-201ENST00000384252 73 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 MIR548A1-201ENST00000385041 97 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 MIR520G-201ENST00000385064 90 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 MIR634-201ENST00000385208 97 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 RNA5SP323-201ENST00000391094 133 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 Y_RNA.709-201ENST00000516952 92 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 AC091178.2-201ENST00000584401 117 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 MIR6895-201ENST00000613497 78 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 MIR6079-201ENST00000635807 62 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 MIR338-201ENST00000636369 67 ntBASIC2.6□□□□□ -1.99
PCDH18Q9HCL0 SNORD58C-201ENST00000365223 64 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 SNORA25B-201ENST00000365507 128 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 SNORA8-201ENST00000384574 139 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 MIR561-201ENST00000385216 97 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 MIR1263-201ENST00000408324 86 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 RNA5SP184-201ENST00000411071 108 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 AL109933.2-201ENST00000452651 260 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 Y_RNA.651-201ENST00000459380 103 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 RNU7-99P-201ENST00000516271 62 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 AC097639.2-201ENST00000603159 172 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 AL591926.4-201ENST00000616895 298 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 AL121890.5-201ENST00000620848 304 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 U6.108-201ENST00000637764 58 ntBASIC2.59□□□□□ -1.99
PCDH18Q9HCL0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
PCDH18Q9HCL0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PCDH18Q9HCL0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDH18Q9HCL0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PCDH18Q9HCL0 Y_RNA.35-201ENST00000362601 101 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 Y_RNA.280-201ENST00000364765 112 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 MIR548A3-201ENST00000385297 97 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 AL603914.1-201ENST00000401964 204 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 MIR1262-201ENST00000408276 93 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 RNA5SP127-201ENST00000411051 133 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.58□□□□□ -2
PCDH18Q9HCL0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.58□□□□□ -2
PCDH18Q9HCL0 RPS26P45-201ENST00000471748 340 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 MIR5694-201ENST00000581190 76 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 AL359075.3-201ENST00000613288 217 ntBASIC2.58□□□□□ -2
PCDH18Q9HCL0 SNORA1B-201ENST00000362535 133 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 RNU6-862P-201ENST00000362804 105 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 SNORD68-201ENST00000363214 84 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 SNORA26-201ENST00000391286 122 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PCDH18Q9HCL0 AC092427.1-202ENST00000430569 476 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 CYCTP-201ENST00000504253 315 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 RNU6-693P-201ENST00000516134 107 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 RNU6-504P-201ENST00000516568 104 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 RNU1-142P-201ENST00000516682 145 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 IGKV1-22-201ENST00000524313 326 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 AC022202.1-201ENST00000613515 211 ntBASIC2.57□□□□□ -2
PCDH18Q9HCL0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
PCDH18Q9HCL0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
PCDH18Q9HCL0 SNORA5B-201ENST00000363786 132 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 AL163195.1-201ENST00000496941 348 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.56□□□□□ -2
PCDH18Q9HCL0 RN7SKP19-201ENST00000516016 252 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 RNU6-589P-201ENST00000516485 107 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 MIR4662B-201ENST00000579498 81 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 AL670379.3-201ENST00000605040 251 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 U6.95-201ENST00000636931 70 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
PCDH18Q9HCL0 AC018630.2-201ENST00000534866 2403 ntBASIC2.56□□□□□ -2
PCDH18Q9HCL0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.55□□□□□ -2
PCDH18Q9HCL0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDH18Q9HCL0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.55□□□□□ -2
PCDH18Q9HCL0 SNORD116-21-201ENST00000384507 92 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 MIR624-201ENST00000385217 97 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 MIR891A-201ENST00000401237 79 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
PCDH18Q9HCL0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.55□□□□□ -2
PCDH18Q9HCL0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
PCDH18Q9HCL0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.55□□□□□ -2
PCDH18Q9HCL0 AL049830.1-201ENST00000468034 425 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.55□□□□□ -2
PCDH18Q9HCL0 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 AC008507.4-201ENST00000585464 127 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 MIR376A2-201ENST00000636782 80 ntBASIC2.55□□□□□ -2
PCDH18Q9HCL0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PCDH18Q9HCL0 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 RNU6-647P-201ENST00000364243 107 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 AC003685.2-201ENST00000422795 395 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms