Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 AC006023.1-201ENST00000603944 259 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 SNORD14A-201ENST00000606526 91 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 AC093831.2-201ENST00000624393 3427 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 RNU6-163P-201ENST00000384396 106 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 RNU6-429P-201ENST00000384582 108 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 SNORA44-201ENST00000384584 132 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 Y_RNA.547-201ENST00000384654 119 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 SCARNA15-202ENST00000516881 127 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 MIR5197-201ENST00000583721 112 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 AL162274.2-201ENST00000614406 332 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 MIR6129-201ENST00000616087 109 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 AL391516.1-201ENST00000554380 2449 ntBASIC3.17□□□□□ -1.9
VRTNQ9H8Y1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 RNU1-51P-201ENST00000365345 176 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 RNU6-1189P-201ENST00000383958 107 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 RNU1-52P-201ENST00000384190 164 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 RNU6-950P-201ENST00000384651 107 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 AC114811.1-201ENST00000507207 168 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 RNU6-781P-201ENST00000516377 101 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 AC108081.1-201ENST00000604358 221 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 U1.36-201ENST00000620684 176 ntBASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VRTNQ9H8Y1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
VRTNQ9H8Y1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VRTNQ9H8Y1 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 SNORA48.2-201ENST00000390926 124 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 AL034345.1-201ENST00000407768 123 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 AC007064.1-201ENST00000412238 351 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 RNU6-113P-201ENST00000516653 101 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 RNU6-1116P-201ENST00000517269 99 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 MIR376A2-201ENST00000636782 80 ntBASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
VRTNQ9H8Y1 Y_RNA.37-201ENST00000362606 108 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 SNORA2.2-201ENST00000365473 135 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 SNORA48.1-201ENST00000390879 135 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 AL445646.1-201ENST00000431784 216 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 CYCTP-201ENST00000504253 315 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 RNVU1-2-201ENST00000516326 135 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 AC027279.3-201ENST00000625055 122 ntBASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.14□□□□□ -1.91
VRTNQ9H8Y1 AC108206.1-201ENST00000570186 4159 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 SNORA63D-201ENST00000364359 132 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 Y_RNA.346-201ENST00000365385 112 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 MIR128-1-201ENST00000384921 82 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 AC004486.1-201ENST00000546846 233 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 AL670379.3-201ENST00000605040 251 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 AC025166.1-201ENST00000612411 163 ntBASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.13□□□□□ -1.91
VRTNQ9H8Y1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 MIRLET7C-201ENST00000362160 84 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 SNORD38C-201ENST00000384381 69 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 MIR634-201ENST00000385208 97 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 MIR548A3-201ENST00000385297 97 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 RNU2-7P-201ENST00000410794 178 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 Z92545.1-201ENST00000411782 234 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 HSPE1P9-201ENST00000440046 311 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 SNORD33.1-201ENST00000516213 88 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 MIR4529-201ENST00000578110 78 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 AC015726.2-201ENST00000620112 122 ntBASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.12□□□□□ -1.91
VRTNQ9H8Y1 SNORA3A-201ENST00000364113 130 ntBASIC3.11□□□□□ -1.91
VRTNQ9H8Y1 MIR520A-201ENST00000384862 85 ntBASIC3.11□□□□□ -1.91
VRTNQ9H8Y1 RNA5SP501-201ENST00000410990 112 ntBASIC3.11□□□□□ -1.91
VRTNQ9H8Y1 AL121890.5-201ENST00000620848 304 ntBASIC3.11□□□□□ -1.91
VRTNQ9H8Y1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
VRTNQ9H8Y1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
VRTNQ9H8Y1 MIRLET7F2-201ENST00000385277 83 ntBASIC3.1□□□□□ -1.91
VRTNQ9H8Y1 RNY4P18-201ENST00000391107 89 ntBASIC3.1□□□□□ -1.91
VRTNQ9H8Y1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms