Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.07□□□□□ -2.42
VCX3BQ9H321 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 RNA5SP214-201ENST00000363378 118 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 SNORA36.1-201ENST00000363424 132 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 RNU6-767P-201ENST00000384132 107 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 RNU6-831P-201ENST00000384548 107 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
VCX3BQ9H321 RNU6-566P-201ENST00000516790 107 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 MTND3P12-201ENST00000559068 328 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 AC104408.1-201ENST00000605241 170 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 Z99129.1-201ENST00000612510 255 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.08□□□□□ -2.42
VCX3BQ9H321 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.08□□□□□ -2.42
VCX3BQ9H321 MIR3974-201ENST00000637126 96 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 AC024614.3-201ENST00000637860 256 ntBASIC-0.08□□□□□ -2.42
VCX3BQ9H321 SNORD114-16-201ENST00000363044 70 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU6-268P-201ENST00000364174 107 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU6-42P-201ENST00000384165 107 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 MIR802-201ENST00000390235 94 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU6-192P-201ENST00000391253 100 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 MTND4LP16-201ENST00000440828 295 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.09□□□□□ -2.42
VCX3BQ9H321 MTND2P22-201ENST00000444325 1033 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 AC026782.1-201ENST00000512952 449 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU2-13P-201ENST00000515909 113 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 SCARNA8-201ENST00000515924 131 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 AC078883.4-201ENST00000623218 367 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 AC098679.4-201ENST00000624241 654 ntBASIC-0.09□□□□□ -2.42
VCX3BQ9H321 AC010332.2-201ENST00000613083 1904 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNU6-324P-201ENST00000363957 106 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 SNORA1.2-201ENST00000365189 134 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNU2-70P-201ENST00000410718 179 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNU6-847P-201ENST00000411115 108 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNU6-373P-201ENST00000411247 98 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 AC074085.1-201ENST00000413598 418 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.1□□□□□ -2.43
VCX3BQ9H321 MTND3P21-201ENST00000433774 331 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 SEPT7P4-201ENST00000437076 306 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNU7-102P-201ENST00000458948 62 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 RNA5SP220-201ENST00000516298 104 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 MIR2355-201ENST00000517199 87 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.1□□□□□ -2.43
VCX3BQ9H321 AC133485.4-201ENST00000561835 220 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 MIR4790-201ENST00000577799 79 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 JPX_2.1-201ENST00000614161 69 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 MIR6740-201ENST00000618268 113 ntBASIC-0.1□□□□□ -2.43
VCX3BQ9H321 MIR411-201ENST00000362239 96 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 SNORD114-23-201ENST00000363536 72 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 SNORA63C-201ENST00000364578 129 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 RPL30P15-201ENST00000457129 321 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 MTND5P5-201ENST00000503764 376 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 RNU6-436P-201ENST00000516171 114 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.11□□□□□ -2.43
VCX3BQ9H321 MIR3678-201ENST00000578455 94 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 MIR4768-201ENST00000585270 74 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 MIR6755-201ENST00000619993 66 ntBASIC-0.11□□□□□ -2.43
VCX3BQ9H321 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RNU6-926P-201ENST00000384075 107 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RNU6-364P-201ENST00000384387 107 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 MIR125B2-201ENST00000385128 89 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RNU2-59P-201ENST00000410482 191 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 AC009161.1-201ENST00000417306 376 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RPL23AP54-201ENST00000495129 419 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RNU6-155P-201ENST00000516347 100 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 SNORA62.5-201ENST00000516634 120 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 RNU7-116P-201ENST00000516940 62 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 AP003327.1-201ENST00000529684 127 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 AC008507.4-201ENST00000585464 127 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.12□□□□□ -2.43
VCX3BQ9H321 MIR1244-1-201ENST00000612829 85 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 MIR1244-3-201ENST00000635744 85 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 MIR1244-2-201ENST00000636449 85 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 MIR1244-4-202ENST00000636813 85 ntBASIC-0.12□□□□□ -2.43
VCX3BQ9H321 SNORA9.1-201ENST00000362412 131 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 RNU4-67P-201ENST00000364569 141 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 RNU6-593P-201ENST00000364716 112 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 PCNPP3-201ENST00000393579 471 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 MIR1257-201ENST00000408490 117 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 RNU6-855P-201ENST00000410395 104 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 MIR18B-201ENST00000454574 71 ntBASIC-0.13□□□□□ -2.43
VCX3BQ9H321 snoU13.16-201ENST00000459350 104 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms