Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MIR1302-2-201ENST00000607096 138 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 MIR369-201ENST00000362155 70 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.203-201ENST00000364106 102 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 AC117470.1-201ENST00000381974 330 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 MIR15B-201ENST00000385045 98 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 POLR2KP2-201ENST00000438155 177 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 AC245047.8-201ENST00000456455 284 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 HMGN1P10-201ENST00000474557 553 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 SEPT14P8-201ENST00000508026 178 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 AC090142.3-201ENST00000519012 385 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 MIR3192-201ENST00000584920 77 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 AP003357.1-201ENST00000604497 148 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 JPX_2.1-201ENST00000614161 69 ntBASIC1.17□□□□□ -2.22
CCDC68Q9H2F9 U8.7-201ENST00000364940 136 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.383-201ENST00000383855 97 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.419-201ENST00000384041 102 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 MIR520C-201ENST00000385005 87 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 MTND4LP11-201ENST00000422184 280 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 RNU7-115P-201ENST00000516433 55 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 SNORA74.3-201ENST00000517108 154 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 SNORD113-5-201ENST00000607261 78 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 MIR548AY-201ENST00000617669 107 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 AC008163.1-202ENST00000636004 2889 ntBASIC1.16□□□□□ -2.22
CCDC68Q9H2F9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
CCDC68Q9H2F9 AL391987.6-201ENST00000305671 199 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 SNORA22-201ENST00000383907 134 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 SNORA22C-201ENST00000384614 134 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 AC127455.1-201ENST00000565496 145 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 PART1_1.1-201ENST00000611761 217 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 AL391903.3-201ENST00000612158 163 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 AC090971.5-201ENST00000621102 293 ntBASIC1.15□□□□□ -2.23
CCDC68Q9H2F9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 SNORD14E-201ENST00000364009 85 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.395-201ENST00000383945 109 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 MIR802-201ENST00000390235 94 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 RNU6-308P-201ENST00000390957 107 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 RNU6-130P-201ENST00000411112 103 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 MTND4P19-201ENST00000446659 478 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 RPS26P48-201ENST00000491713 339 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
CCDC68Q9H2F9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.813-201ENST00000364639 102 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.445-201ENST00000384168 102 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 RNU6-1248P-201ENST00000391096 64 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 snoU13.25-201ENST00000458945 104 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 SNORD124-201ENST00000459577 104 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 AC010655.3-201ENST00000478818 450 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 AC124312.5-201ENST00000604451 268 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
CCDC68Q9H2F9 RNU4-80P-201ENST00000363200 141 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 RNY1P10-201ENST00000363268 113 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.286-201ENST00000364813 102 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 SNORA75.2-201ENST00000391138 150 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 SNORA75.3-201ENST00000391231 150 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 RNU6-1046P-201ENST00000516538 107 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 AC136932.1-201ENST00000574771 208 ntBASIC1.12□□□□□ -2.23
CCDC68Q9H2F9 RNA5SP264-201ENST00000363115 107 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 SNORD42.2-201ENST00000365570 69 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 RNU6-969P-201ENST00000383900 105 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 RNU6-397P-201ENST00000516226 104 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 RNU7-43P-201ENST00000516554 64 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 AC136628.3-201ENST00000521868 290 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 MIR2681-201ENST00000581814 105 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.31-201ENST00000362574 102 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 SNORD113-8-201ENST00000363497 74 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 MIR200A-201ENST00000384875 90 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 SNORA36B-201ENST00000410438 131 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 Y_RNA.639-201ENST00000458981 102 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 RNU7-141P-201ENST00000459304 62 ntBASIC1.1□□□□□ -2.23
CCDC68Q9H2F9 RNU6-437P-201ENST00000459408 95 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms