Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Y_RNA.118-201ENST00000363300 101 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU1-96P-201ENST00000364163 162 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 Y_RNA.293-201ENST00000364908 93 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
CDT1Q9H211 Y_RNA.412-201ENST00000384001 104 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 Y_RNA.464-201ENST00000384282 110 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU6-125P-201ENST00000384505 107 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 MIR1278-201ENST00000408753 81 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU6-710P-201ENST00000410424 105 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU6-394P-201ENST00000410735 107 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU6-561P-201ENST00000516222 102 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU6-346P-201ENST00000516288 111 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNVU1-2-201ENST00000516326 135 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU7-115P-201ENST00000516433 55 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 AL137100.2-201ENST00000555786 315 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 AC015720.1-201ENST00000565251 277 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
CDT1Q9H211 MIR3133-201ENST00000583157 78 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 MIR4438-201ENST00000585271 93 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 AC006435.5-201ENST00000624486 112 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CDT1Q9H211 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDT1Q9H211 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
CDT1Q9H211 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDT1Q9H211 SNORD114-7-201ENST00000362520 77 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 Y_RNA.170-201ENST00000363746 110 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 RNU6-271P-201ENST00000363858 105 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 RNU6-899P-201ENST00000363947 107 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 RNU6-969P-201ENST00000383900 105 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 Y_RNA.435-201ENST00000384095 112 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 Y_RNA.506-201ENST00000384494 102 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 RNU6-1186P-201ENST00000410429 97 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 HSPE1P21-201ENST00000438283 308 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 MRPS17P9-201ENST00000511924 393 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 Y_RNA.662-201ENST00000516028 97 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 RNU6-1212P-201ENST00000517023 104 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 U6.73-201ENST00000619194 103 ntBASIC1.95□□□□□ -2.1
CDT1Q9H211 Y_RNA.7-201ENST00000362352 102 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 Y_RNA.8-201ENST00000362353 102 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 RNU1-22P-201ENST00000363334 158 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 Y_RNA.508-201ENST00000384502 114 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDT1Q9H211 SNORA36B-201ENST00000410438 131 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.94□□□□□ -2.1
CDT1Q9H211 CST2P1-201ENST00000425770 87 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.94□□□□□ -2.1
CDT1Q9H211 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
CDT1Q9H211 HSPE1P13-201ENST00000451143 297 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 AC245047.8-201ENST00000456455 284 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 SNORA70.12-201ENST00000516084 153 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 RNU7-128P-201ENST00000517247 62 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 POLR3GP1-201ENST00000594073 261 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 U6.108-201ENST00000637764 58 ntBASIC1.94□□□□□ -2.1
CDT1Q9H211 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CDT1Q9H211 Y_RNA.182-201ENST00000363880 111 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 RNU6-1130P-201ENST00000365434 107 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 Y_RNA.398-201ENST00000383952 99 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 MIR548M-201ENST00000408260 86 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 EBAG9P1-201ENST00000418955 543 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.93□□□□□ -2.1
CDT1Q9H211 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.93□□□□□ -2.1
CDT1Q9H211 AC097462.1-201ENST00000514125 324 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 MIR3144-201ENST00000579460 79 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 AL929325.1-201ENST00000603096 117 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 AP003357.1-201ENST00000604497 148 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 AL359075.3-201ENST00000613288 217 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 MIR548AY-201ENST00000617669 107 ntBASIC1.93□□□□□ -2.1
CDT1Q9H211 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDT1Q9H211 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CDT1Q9H211 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CDT1Q9H211 RNU6-1205P-201ENST00000363625 106 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 RNU4-17P-201ENST00000365598 141 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 RNU6-1323P-201ENST00000384025 107 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 Y_RNA.441-201ENST00000384123 112 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 AC091021.1-201ENST00000468051 388 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 RNU7-172P-201ENST00000517125 64 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.92□□□□□ -2.1
CDT1Q9H211 MIR4781-201ENST00000585250 76 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 AC005972.2-201ENST00000604690 348 ntBASIC1.92□□□□□ -2.1
CDT1Q9H211 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDT1Q9H211 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CDT1Q9H211 Y_RNA.229-201ENST00000364347 113 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 SNORA8.3-201ENST00000384679 139 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDT1Q9H211 RNA5SP323-201ENST00000391094 133 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 283.2 ms