Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL078603.1-201ENST00000603824 313 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 MIR3662-201ENST00000637030 95 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 AC010332.2-201ENST00000613083 1904 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 SNORD114-23-201ENST00000363536 72 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 RNU6-364P-201ENST00000384387 107 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 MTND1P17-201ENST00000448961 204 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 U8.19-201ENST00000459095 133 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 RPL23AP54-201ENST00000495129 419 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 RNU6-864P-201ENST00000516256 108 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 AC133485.4-201ENST00000561835 220 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 MIR3678-201ENST00000578455 94 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 MIR4290-201ENST00000583807 95 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 AC023932.2-201ENST00000603176 175 ntBASIC-0.13□□□□□ -2.43
NKX6-2Q9C056 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 RNU6-926P-201ENST00000384075 107 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 SNRPGP14-201ENST00000435400 219 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 AC091959.1-201ENST00000495857 238 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 SCARNA8-201ENST00000515924 131 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 RNU6-830P-201ENST00000516353 107 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 RNU4-77P-201ENST00000516692 156 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 RN7SKP299-201ENST00000606679 301 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 JPX_2.1-201ENST00000614161 69 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 AC027514.1-201ENST00000588561 1603 ntBASIC-0.14□□□□□ -2.43
NKX6-2Q9C056 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 RNU6-268P-201ENST00000364174 107 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 AC011352.1-201ENST00000512300 793 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 RNA5SP436-201ENST00000516020 115 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 SNORA62.5-201ENST00000516634 120 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 AC007742.2-201ENST00000618226 398 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 MIR371B-201ENST00000638082 66 ntBASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
NKX6-2Q9C056 SNORA9.1-201ENST00000362412 131 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 SNORA36.1-201ENST00000363424 132 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR499A-201ENST00000384903 122 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU6-192P-201ENST00000391253 100 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR1257-201ENST00000408490 117 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU6-855P-201ENST00000410395 104 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU6-847P-201ENST00000411115 108 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU7-129P-201ENST00000516128 62 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNA5SP220-201ENST00000516298 104 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU6-155P-201ENST00000516347 100 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU6-566P-201ENST00000516790 107 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR4790-201ENST00000577799 79 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 AC018462.2-201ENST00000605375 395 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR1244-1-201ENST00000612829 85 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR6740-201ENST00000618268 113 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR1244-3-201ENST00000635744 85 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR1244-2-201ENST00000636449 85 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 MIR1244-4-202ENST00000636813 85 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 AC024614.3-201ENST00000637860 256 ntBASIC-0.16□□□□□ -2.44
NKX6-2Q9C056 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 SNORA1.2-201ENST00000365189 134 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNA5SP117-201ENST00000365294 118 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-831P-201ENST00000384548 107 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 MIR518F-201ENST00000384973 87 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 MIR125B2-201ENST00000385128 89 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-747P-201ENST00000390928 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-241P-201ENST00000391148 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 PCNPP3-201ENST00000393579 471 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-447P-201ENST00000410293 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-355P-201ENST00000410427 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-791P-201ENST00000410467 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU2-59P-201ENST00000410482 191 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-705P-201ENST00000410601 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-860P-201ENST00000410860 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 RNU6-785P-201ENST00000411324 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 AC074085.1-201ENST00000413598 418 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 MTND4LP16-201ENST00000440828 295 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 AC026782.1-201ENST00000512952 449 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 MTND3P12-201ENST00000559068 328 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 AC087685.1-201ENST00000587507 141 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 U6.90-201ENST00000614007 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 U6.70-201ENST00000620287 104 ntBASIC-0.17□□□□□ -2.44
NKX6-2Q9C056 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.18□□□□□ -2.44
NKX6-2Q9C056 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.18□□□□□ -2.44
NKX6-2Q9C056 RNU6-966P-201ENST00000516479 104 ntBASIC-0.18□□□□□ -2.44
NKX6-2Q9C056 RNU7-156P-201ENST00000517214 74 ntBASIC-0.18□□□□□ -2.44
NKX6-2Q9C056 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.18□□□□□ -2.44
NKX6-2Q9C056 Z99129.1-201ENST00000612510 255 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms