Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HMGN1P10-201ENST00000474557 553 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 RN7SKP179-201ENST00000516126 217 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 RNU1-142P-201ENST00000516682 145 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 SNORA40.15-201ENST00000516884 107 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 MIR3684-201ENST00000579779 74 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 AC006380.1-201ENST00000603598 186 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 AC069114.2-201ENST00000604699 304 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 SNORD113-5-201ENST00000607261 78 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 MIR6515-201ENST00000619843 57 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 AC095038.3-201ENST00000634439 195 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 SNORD114-7-201ENST00000362520 77 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1309P-201ENST00000363305 108 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1048P-201ENST00000364054 107 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-801P-201ENST00000364087 105 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.310-201ENST00000365063 113 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-21P-201ENST00000384710 107 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.574-201ENST00000384766 95 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNA5SP323-201ENST00000391094 133 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1203P-201ENST00000410703 110 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU2-14P-201ENST00000411053 191 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 AL390729.2-201ENST00000416137 156 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 snoU13.9-201ENST00000458927 103 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AC091021.1-201ENST00000468051 388 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-191P-201ENST00000516295 94 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 RNU6-570P-201ENST00000517051 105 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AC024995.1-201ENST00000523014 93 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 RPL21P9-201ENST00000556149 474 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AC004832.4-201ENST00000608952 331 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 AP001282.2-201ENST00000616149 309 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 MIR6788-201ENST00000618842 66 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 MIR6079-201ENST00000635807 62 ntBASIC1□□□□□ -2.25
RSPO3Q9BXY4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1□□□□□ -2.25
RSPO3Q9BXY4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
RSPO3Q9BXY4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.47-201ENST00000362697 108 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.152-201ENST00000363578 100 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.396-201ENST00000383949 103 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1080P-201ENST00000383982 107 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 MIR520A-201ENST00000384862 85 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 MTCO1P5-201ENST00000433573 344 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 AL162725.1-201ENST00000435405 301 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 RPS20P10-201ENST00000451209 253 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1045P-201ENST00000516321 107 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 AC019288.1-201ENST00000557918 224 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 MIR8062-201ENST00000621515 85 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 AC018630.2-201ENST00000534866 2403 ntBASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RSPO3Q9BXY4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 RNU4-90P-201ENST00000362773 141 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 RNU6-271P-201ENST00000363858 105 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.569-201ENST00000384749 103 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 MIR515-2-201ENST00000384883 83 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 MIR515-1-201ENST00000384884 83 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 SNORA26.5-201ENST00000391215 123 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 POLR2KP2-201ENST00000438155 177 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 HSPE1P13-201ENST00000451143 297 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1291P-201ENST00000516591 104 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 DEFB108E-201ENST00000524692 240 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 SNORA77B-201ENST00000578179 125 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 AL929325.1-201ENST00000603096 117 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 MIR8054-201ENST00000620877 86 ntBASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.98□□□□□ -2.25
RSPO3Q9BXY4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 SNORA1B-201ENST00000362535 133 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.237-201ENST00000364439 102 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.267-201ENST00000364679 109 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 U8.7-201ENST00000364940 136 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-290P-201ENST00000365212 101 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.341-201ENST00000365341 102 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-574P-201ENST00000384265 107 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-440P-201ENST00000390882 105 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-855P-201ENST00000410395 104 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-651P-201ENST00000411040 105 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 Z98949.2-201ENST00000440996 144 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 SUMO1P2-201ENST00000452524 304 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.637-201ENST00000459424 114 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 COX6CP14-201ENST00000469580 174 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 MTCO2P24-201ENST00000515611 426 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1143P-201ENST00000516125 104 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1338P-201ENST00000516328 91 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 SCARNA24.2-201ENST00000516968 130 ntBASIC0.97□□□□□ -2.25
RSPO3Q9BXY4 AC134026.1-201ENST00000623249 2239 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms