Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NDC1Q9BTX1 AC245047.4-201ENST00000433189 144 ntBASIC2.32□□□□□ -2.04
NDC1Q9BTX1 AC234781.5-201ENST00000508429 271 ntBASIC2.32□□□□□ -2.04
NDC1Q9BTX1 RNA5SP153-201ENST00000516498 76 ntBASIC2.32□□□□□ -2.04
NDC1Q9BTX1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.32□□□□□ -2.04
NDC1Q9BTX1 MIR6079-201ENST00000635807 62 ntBASIC2.32□□□□□ -2.04
NDC1Q9BTX1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NDC1Q9BTX1 RNA5SP289-201ENST00000362332 137 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 Y_RNA.71-201ENST00000362892 104 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 Y_RNA.261-201ENST00000364631 102 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 MIR539-201ENST00000365690 78 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 AC008267.6-201ENST00000441664 139 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 OR9P1P-201ENST00000496431 281 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 RNU1-41P-201ENST00000516161 162 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 RNU1-48P-201ENST00000516400 162 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 RNU2-56P-201ENST00000516826 190 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 RNU6-1234P-201ENST00000516877 103 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 RNU6-341P-201ENST00000516973 96 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 AC090142.3-201ENST00000519012 385 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
NDC1Q9BTX1 AC005786.1-201ENST00000588553 154 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 TUG1_4.1-201ENST00000619464 181 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 AP001340.1-201ENST00000624405 217 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 AC018630.2-201ENST00000534866 2403 ntBASIC2.31□□□□□ -2.04
NDC1Q9BTX1 ZNF271P-202ENST00000465539 1970 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 SNORA25.7-201ENST00000364375 127 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 RNU6-1138P-201ENST00000365359 106 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 RNU1-109P-201ENST00000383960 147 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 RNU6-735P-201ENST00000410612 107 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 BX510359.4-201ENST00000423750 193 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.3□□□□□ -2.04
NDC1Q9BTX1 RNU7-94P-201ENST00000459576 63 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 HMGN1P7-201ENST00000491722 313 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 AP001328.1-201ENST00000528550 176 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 AC097639.2-201ENST00000603159 172 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 AC011603.4-201ENST00000611325 277 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NDC1Q9BTX1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NDC1Q9BTX1 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
NDC1Q9BTX1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 Y_RNA.127-201ENST00000363386 109 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 SNORD114-30-201ENST00000364448 72 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 SNORA12.1-201ENST00000390873 148 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 Y_RNA.584-201ENST00000391090 114 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 SNORA3.2-201ENST00000408221 125 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 RNU4-53P-201ENST00000410828 140 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 SNRPGP10-201ENST00000432323 225 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 AC099677.2-201ENST00000436385 175 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 RPS26P45-201ENST00000471748 340 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 AL163195.1-201ENST00000496941 348 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
NDC1Q9BTX1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NDC1Q9BTX1 RNU6-915P-201ENST00000364943 103 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 RNU11-3P-201ENST00000391111 133 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 SNORA26-201ENST00000391286 122 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 RNU6-1333P-201ENST00000516162 93 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.28□□□□□ -2.04
NDC1Q9BTX1 MIR4662B-201ENST00000579498 81 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.28□□□□□ -2.04
NDC1Q9BTX1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
NDC1Q9BTX1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 SNORA1B-201ENST00000362535 133 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 RNA5SP205-201ENST00000364653 136 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 SNORD116-14-201ENST00000383894 92 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 SNORD116-17-201ENST00000383929 92 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 SNORD116-15-201ENST00000384445 92 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 SNORD116-19-201ENST00000384729 92 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 MTATP6P29-201ENST00000415057 132 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 Z98742.3-201ENST00000418637 326 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 AL358944.1-201ENST00000528537 144 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 U7.2-201ENST00000607576 63 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 AL591926.4-201ENST00000616895 298 ntBASIC2.27□□□□□ -2.05
NDC1Q9BTX1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
NDC1Q9BTX1 RNA5SP432-201ENST00000362480 116 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 Y_RNA.66-201ENST00000362862 102 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 RNU6-80P-201ENST00000384195 107 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 MIR518A2-201ENST00000384966 87 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 RNA5SP465-201ENST00000391195 109 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 HMGN2P35-201ENST00000412164 270 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms