Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC113195.1-201ENST00000579952 141 ntBASIC1.22□□□□□ -2.21
CPNE1Q99829 MIR4680-201ENST00000580906 66 ntBASIC1.22□□□□□ -2.21
CPNE1Q99829 FAM106DP-201ENST00000586416 501 ntBASIC1.22□□□□□ -2.21
CPNE1Q99829 AC044792.1-201ENST00000593294 196 ntBASIC1.22□□□□□ -2.21
CPNE1Q99829 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CPNE1Q99829 RNU6-770P-201ENST00000363929 105 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 snoU2-30.1-201ENST00000365012 70 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 Y_RNA.418-201ENST00000384029 102 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 SNORA72.4-201ENST00000384174 132 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 Y_RNA.569-201ENST00000384749 103 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 MIR526A1-201ENST00000384897 85 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 MTCYBP6-201ENST00000441810 138 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 HMGN2P32-201ENST00000444648 269 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 MTND4LP30-201ENST00000454092 297 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.21□□□□□ -2.22
CPNE1Q99829 RNU6-1143P-201ENST00000516125 104 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 RNU6-191P-201ENST00000516295 94 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 SNORD45.4-201ENST00000516629 73 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 AC015712.3-201ENST00000559380 164 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.21□□□□□ -2.22
CPNE1Q99829 JPX_2.1-201ENST00000614161 69 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 AC007742.2-201ENST00000618226 398 ntBASIC1.21□□□□□ -2.22
CPNE1Q99829 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
CPNE1Q99829 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 Y_RNA.336-201ENST00000365307 109 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CPNE1Q99829 MIR1298-201ENST00000408783 112 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 AC005534.2-201ENST00000431047 433 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 RPL39P39-201ENST00000455840 151 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 RNU7-141P-201ENST00000459304 62 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
CPNE1Q99829 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.2□□□□□ -2.22
CPNE1Q99829 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CPNE1Q99829 Y_RNA.105-201ENST00000363182 111 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 RNU6-801P-201ENST00000364087 105 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 Y_RNA.210-201ENST00000364161 110 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 Y_RNA.214-201ENST00000364201 112 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 RNU6-290P-201ENST00000365212 101 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 SNORA33.2-201ENST00000365413 134 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 SNORA36B-201ENST00000410438 131 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 RNU6-121P-201ENST00000410525 99 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 ELOCP20-201ENST00000422460 345 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 LINC01399-202ENST00000458450 244 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 RNU6-947P-201ENST00000516264 106 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 RNY3P15-201ENST00000516297 97 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 MIR2681-201ENST00000581814 105 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 AC087685.1-201ENST00000587507 141 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
CPNE1Q99829 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.19□□□□□ -2.22
CPNE1Q99829 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CPNE1Q99829 Y_RNA.19-201ENST00000362462 99 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 SNORD50B-201ENST00000364995 70 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-1227P-201ENST00000383981 107 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-639P-201ENST00000384074 107 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 MIR15B-201ENST00000385045 98 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU2-14P-201ENST00000411053 191 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-437P-201ENST00000459408 95 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-764P-201ENST00000516396 105 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 AC037487.3-201ENST00000606668 112 ntBASIC1.18□□□□□ -2.22
CPNE1Q99829 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CPNE1Q99829 RNU6-674P-201ENST00000363831 107 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 RNU6-899P-201ENST00000363947 107 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 RNU6-1048P-201ENST00000364054 107 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 SNORA53-201ENST00000391141 249 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 SNORA17.3-201ENST00000391159 129 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 SNORA26.5-201ENST00000391215 123 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 MTCO1P5-201ENST00000433573 344 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.17□□□□□ -2.22
CPNE1Q99829 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 RNU2-31P-201ENST00000516954 155 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CPNE1Q99829 AL353997.5-201ENST00000618886 171 ntBASIC1.17□□□□□ -2.22
CPNE1Q99829 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CPNE1Q99829 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.16□□□□□ -2.22
CPNE1Q99829 Y_RNA.153-201ENST00000363615 91 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 RNU6-1209P-201ENST00000363655 107 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 SNORD14E-201ENST00000364009 85 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 Y_RNA.796-201ENST00000364268 102 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 Y_RNA.799-201ENST00000364992 102 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 RNU6-326P-201ENST00000365480 107 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 RNU6-985P-201ENST00000410182 104 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 AC005357.1-201ENST00000588399 301 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 AL512605.2-201ENST00000592972 256 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
CPNE1Q99829 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms