Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 RNU6-662P-201ENST00000384253 104 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 RNU6-763P-201ENST00000390865 106 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 RNU6-321P-201ENST00000410912 106 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 RNU7-115P-201ENST00000516433 55 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 SNORA27.4-201ENST00000516650 95 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
SIN3AQ96ST3 MIR4709-201ENST00000577272 72 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.72□□□□□ -2.13
SIN3AQ96ST3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
SIN3AQ96ST3 AC134026.1-201ENST00000623249 2239 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 RNU6-514P-201ENST00000384208 107 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 MIR562-201ENST00000384894 95 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 COX6CP10-201ENST00000416832 224 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC233266.1-201ENST00000454518 96 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 RNU7-141P-201ENST00000459304 62 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC117454.1-201ENST00000491120 168 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AL358944.1-201ENST00000528537 144 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC011604.1-201ENST00000545978 196 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 MIR4503-201ENST00000582187 83 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AL512605.2-201ENST00000592972 256 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AP003357.1-201ENST00000604497 148 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC242852.1-201ENST00000612151 96 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC021506.2-201ENST00000612354 169 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AL078604.3-201ENST00000615580 211 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 MIR548AY-201ENST00000617669 107 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC244015.1-201ENST00000622301 99 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC095038.3-201ENST00000634439 195 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 U6.104-201ENST00000637979 90 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 AC068700.1-201ENST00000565862 3754 ntBASIC1.71□□□□□ -2.14
SIN3AQ96ST3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SIN3AQ96ST3 RNU6-1272P-201ENST00000362776 107 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 RNU6-574P-201ENST00000384265 107 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 SNORA72-201ENST00000384339 132 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 RNU6-950P-201ENST00000384651 107 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 MIR1302-3-201ENST00000408128 138 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 RN7SKP200-201ENST00000410564 320 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 RNU2-38P-201ENST00000410856 79 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 AL161935.2-201ENST00000414627 60 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.7□□□□□ -2.14
SIN3AQ96ST3 RNU7-34P-201ENST00000459394 64 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 RNU2-56P-201ENST00000516826 190 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 AC024405.2-202ENST00000532731 184 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 AC127455.1-201ENST00000565496 145 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 POLR3GP1-201ENST00000594073 261 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 U2.14-201ENST00000615943 113 ntBASIC1.7□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.275-201ENST00000364726 110 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 MIR194-1-201ENST00000384892 85 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SIN3AQ96ST3 JTBP1-201ENST00000441314 247 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 STAG3L5P-204ENST00000443759 179 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 SNORD127-201ENST00000458892 86 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 U8.19-201ENST00000459095 133 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 OR9P1P-201ENST00000496431 281 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 RNU7-116P-201ENST00000516940 62 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 AC012433.1-201ENST00000588916 398 ntBASIC1.69□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 RNU6-196P-201ENST00000384315 107 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 Z98949.2-201ENST00000440996 144 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 AL049830.1-201ENST00000468034 425 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.68□□□□□ -2.14
SIN3AQ96ST3 7SK.10-201ENST00000621414 298 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.68□□□□□ -2.14
SIN3AQ96ST3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.67□□□□□ -2.14
SIN3AQ96ST3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SIN3AQ96ST3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SIN3AQ96ST3 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 RNU6-414P-201ENST00000363705 104 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 RNU6-463P-201ENST00000384340 107 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 MTCO2P33-201ENST00000402100 465 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 RNU6-651P-201ENST00000411040 105 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 FTH1P12-201ENST00000432137 551 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 AC005357.1-201ENST00000588399 301 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 AL008718.3-201ENST00000610217 321 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 U4.1-201ENST00000620349 87 ntBASIC1.67□□□□□ -2.14
SIN3AQ96ST3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
SIN3AQ96ST3 snoU18.1-201ENST00000629629 71 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms