Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LINC01399-202ENST00000458450 244 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 Y_RNA.638-201ENST00000459374 113 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 RPL23AP54-201ENST00000495129 419 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 RNU7-115P-201ENST00000516433 55 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 SNORD45.4-201ENST00000516629 73 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 RNU1-92P-201ENST00000517017 135 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 RNU6-897P-201ENST00000517135 105 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 AC127455.1-201ENST00000565496 145 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 MIR548AY-201ENST00000617669 107 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 ZNF209P-201ENST00000593450 2304 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RAB40CQ96S21 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 U8.7-201ENST00000364940 136 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 snoU2-30.1-201ENST00000365012 70 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 Y_RNA.338-201ENST00000365320 114 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 MIR222-201ENST00000384992 110 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 RNU6-1248P-201ENST00000391096 64 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 AC009474.2-201ENST00000451383 136 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 Y_RNA.711-201ENST00000516993 102 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 JPX_2.1-201ENST00000614161 69 ntBASIC1.04□□□□□ -2.24
RAB40CQ96S21 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.04□□□□□ -2.24
RAB40CQ96S21 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
RAB40CQ96S21 Y_RNA.203-201ENST00000364106 102 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 Y_RNA.222-201ENST00000364264 102 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 MIR516B2-201ENST00000385190 85 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 SNORD115-46-201ENST00000390982 71 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 RNU6-1054P-201ENST00000411293 104 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.03□□□□□ -2.24
RAB40CQ96S21 AC108667.1-201ENST00000428618 249 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 HMGN2P32-201ENST00000444648 269 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 HSPE1P25-201ENST00000455484 251 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.03□□□□□ -2.24
RAB40CQ96S21 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.03□□□□□ -2.24
RAB40CQ96S21 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
RAB40CQ96S21 RNU4-90P-201ENST00000362773 141 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 RNU6-1048P-201ENST00000364054 107 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 Y_RNA.418-201ENST00000384029 102 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 RNU6-102P-201ENST00000384485 104 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 RNU6-910P-201ENST00000390844 107 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 SNORA17.3-201ENST00000391159 129 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.02□□□□□ -2.25
RAB40CQ96S21 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 AC092473.1-201ENST00000441098 221 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 RNU1-123P-201ENST00000458950 160 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 RNU7-141P-201ENST00000459304 62 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 SNORA40.15-201ENST00000516884 107 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 AC136628.3-201ENST00000521868 290 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.02□□□□□ -2.25
RAB40CQ96S21 MIR3171-201ENST00000584270 74 ntBASIC1.02□□□□□ -2.25
RAB40CQ96S21 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
RAB40CQ96S21 MIR337-201ENST00000362281 93 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 Y_RNA.158-201ENST00000363651 101 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 SNORD50B-201ENST00000364995 70 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 Y_RNA.380-201ENST00000365663 111 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 AC117470.1-201ENST00000381974 330 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 SNORA72.4-201ENST00000384174 132 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 MIR136-201ENST00000385207 82 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RAB40CQ96S21 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 RNU4-62P-201ENST00000410125 130 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 RNU2-14P-201ENST00000411053 191 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 RNU6-496P-201ENST00000516145 99 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 RNU6-191P-201ENST00000516295 94 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 AC090142.3-201ENST00000519012 385 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 AC090821.2-201ENST00000523552 176 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 DNAJC19P9-201ENST00000555084 351 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
RAB40CQ96S21 SNORD14E-201ENST00000364009 85 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 RNU6-801P-201ENST00000364087 105 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 Y_RNA.216-201ENST00000364205 93 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 Y_RNA.455-201ENST00000384230 98 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 Y_RNA.527-201ENST00000384573 102 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 Y_RNA.569-201ENST00000384749 103 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 MIR15B-201ENST00000385045 98 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 SNORA36B-201ENST00000410438 131 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 RNU6-437P-201ENST00000459408 95 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 snoU13.31-201ENST00000607291 104 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1□□□□□ -2.25
RAB40CQ96S21 AL096861.1-201ENST00000610899 123 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1□□□□□ -2.25
RAB40CQ96S21 AC007742.2-201ENST00000618226 398 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
RAB40CQ96S21 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1□□□□□ -2.25
RAB40CQ96S21 Y_RNA.105-201ENST00000363182 111 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 Y_RNA.136-201ENST00000363444 102 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 RNU6-1209P-201ENST00000363655 107 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 RNU6-969P-201ENST00000383900 105 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 SNORD12-201ENST00000391002 90 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 Y_RNA.581-201ENST00000391017 97 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 SNORA26.5-201ENST00000391215 123 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
RAB40CQ96S21 RNU6-121P-201ENST00000410525 99 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms