Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL160413.1-201ENST00000622780 310 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 AL606534.2-204ENST00000635008 178 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 MIR924-201ENST00000638017 53 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL21A1Q96P44 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNA5SP257-201ENST00000363023 116 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-626P-201ENST00000363354 107 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 SNORD115-30-201ENST00000364117 82 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 Y_RNA.243-201ENST00000364481 109 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 Y_RNA.265-201ENST00000364677 108 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 Y_RNA.431-201ENST00000384086 102 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-1310P-201ENST00000384153 107 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-474P-201ENST00000384243 107 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-424P-201ENST00000384367 105 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 SNORA80D-201ENST00000384488 135 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-910P-201ENST00000390844 107 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNA5SP482-201ENST00000391269 118 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-1199P-201ENST00000411249 104 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 MCFD2P1-201ENST00000417812 300 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 PMCHL1-202ENST00000423102 261 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AL160004.2-201ENST00000432935 350 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 MTND4P19-201ENST00000446659 478 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNA5SP20-201ENST00000515976 84 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU2-56P-201ENST00000516826 190 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU6-341P-201ENST00000516973 96 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 RNU7-172P-201ENST00000517125 64 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AL358944.1-201ENST00000528537 144 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AP002004.2-201ENST00000531656 154 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.76□□□□□ -2.29
COL21A1Q96P44 AC005176.2-201ENST00000596933 147 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AL109933.3-201ENST00000619095 188 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AC090971.5-201ENST00000621102 293 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 AC090574.1-201ENST00000623186 233 ntBASIC0.76□□□□□ -2.29
COL21A1Q96P44 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
COL21A1Q96P44 Y_RNA.138-201ENST00000363462 102 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 RNU6-117P-201ENST00000365415 107 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 Y_RNA.361-201ENST00000365515 120 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.75□□□□□ -2.29
COL21A1Q96P44 Y_RNA.445-201ENST00000384168 102 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 Y_RNA.460-201ENST00000384255 102 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 MIR873-201ENST00000401120 77 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 RNU2-54P-201ENST00000410299 190 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 HAR1A.1-201ENST00000459583 118 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 SNORA40.14-201ENST00000516543 86 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 RN7SKP295-201ENST00000517264 153 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL21A1Q96P44 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 AC106754.2-201ENST00000623006 233 ntBASIC0.75□□□□□ -2.29
COL21A1Q96P44 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
COL21A1Q96P44 RNU6-797P-201ENST00000363101 109 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 Y_RNA.148-201ENST00000363557 117 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 Y_RNA.446-201ENST00000384178 104 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 SNORD41-201ENST00000386967 70 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 Y_RNA.645-201ENST00000391229 102 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AL031003.1-201ENST00000404229 172 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 RNU2-64P-201ENST00000411315 191 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.74□□□□□ -2.29
COL21A1Q96P44 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.74□□□□□ -2.29
COL21A1Q96P44 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.74□□□□□ -2.29
COL21A1Q96P44 AC091021.1-201ENST00000468051 388 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 RNU6-155P-201ENST00000516347 100 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 RNU6-63P-201ENST00000516690 95 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.74□□□□□ -2.29
COL21A1Q96P44 AC036111.3-201ENST00000526389 112 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AC040926.1-201ENST00000530195 238 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 MIR4423-201ENST00000580922 80 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AC091178.2-201ENST00000584401 117 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 RPS29P30-201ENST00000600975 111 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 PART1_1.1-201ENST00000611761 217 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AC010205.1-201ENST00000616668 449 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 AL138825.1-201ENST00000618587 192 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.74□□□□□ -2.29
COL21A1Q96P44 SNORD114-7-201ENST00000362520 77 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 SNORD114-23-201ENST00000363536 72 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 Y_RNA.172-201ENST00000363765 102 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 Y_RNA.230-201ENST00000364348 109 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 RNU6-1175P-201ENST00000365200 107 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 Y_RNA.471-201ENST00000384312 102 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 RNU6-136P-201ENST00000384663 107 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 RNU6-376P-201ENST00000384731 106 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 Y_RNA.570-201ENST00000384750 101 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 MIR1302-11-201ENST00000408051 138 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 MIR1302-9-201ENST00000408365 138 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 MIR1302-10-201ENST00000408734 138 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 RNU6-130P-201ENST00000411112 103 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.73□□□□□ -2.29
COL21A1Q96P44 RPEP5-201ENST00000441137 268 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
COL21A1Q96P44 Y_RNA.631-201ENST00000459607 101 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 AC048334.1-201ENST00000477975 159 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 OR9P1P-201ENST00000496431 281 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 RNU6-475P-201ENST00000516073 104 ntBASIC0.73□□□□□ -2.29
COL21A1Q96P44 SNORA70.12-201ENST00000516084 153 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms