Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-1156P-201ENST00000410365 100 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 RNU6-994P-201ENST00000410507 111 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 SNRPGP10-201ENST00000432323 225 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 AC067940.1-201ENST00000458411 300 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 MTND4P17-201ENST00000470444 350 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.51□□□□□ -2.33
RPRD1AQ96P16 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 RNU7-30P-201ENST00000516835 62 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
RPRD1AQ96P16 AC008133.2-201ENST00000624540 351 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 MIR4251-201ENST00000635819 61 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.112-201ENST00000363250 102 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RPRD1AQ96P16 RNY3P4-201ENST00000384428 101 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 SNORD28B-201ENST00000390993 75 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.5□□□□□ -2.33
RPRD1AQ96P16 MTND1P4-201ENST00000435196 415 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 AC084782.3-201ENST00000612282 578 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 AC011476.5-201ENST00000615594 130 ntBASIC0.5□□□□□ -2.33
RPRD1AQ96P16 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.5□□□□□ -2.33
RPRD1AQ96P16 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.5□□□□□ -2.33
RPRD1AQ96P16 RNU6-626P-201ENST00000363354 107 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.146-201ENST00000363549 102 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 SNORD113.3-201ENST00000364630 78 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.368-201ENST00000365547 113 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 MIR936-201ENST00000401264 98 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 MIR1827-201ENST00000408549 66 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 RNA5SP95-201ENST00000410319 137 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.646-201ENST00000410980 101 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.49□□□□□ -2.33
RPRD1AQ96P16 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.49□□□□□ -2.33
RPRD1AQ96P16 RNU6-358P-201ENST00000516564 75 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.49□□□□□ -2.33
RPRD1AQ96P16 AC093027.1-201ENST00000546698 429 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 AL136317.1-201ENST00000612653 226 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 AC093783.1-201ENST00000612976 329 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.6-201ENST00000362350 114 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.148-201ENST00000363557 117 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 RNY3P11-201ENST00000364153 102 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 RNU6-342P-201ENST00000384521 104 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 SNORD78.2-201ENST00000391076 69 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 SNORA75.6-201ENST00000391318 127 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.48□□□□□ -2.33
RPRD1AQ96P16 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.48□□□□□ -2.33
RPRD1AQ96P16 MIR548AR-201ENST00000582191 57 ntBASIC0.48□□□□□ -2.33
RPRD1AQ96P16 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RPRD1AQ96P16 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 SNORA2B-201ENST00000384583 137 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 RNU6-310P-201ENST00000384655 107 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 RNU6-192P-201ENST00000391253 100 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
RPRD1AQ96P16 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 RNU6-370P-201ENST00000411008 104 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 MTCO2P27-201ENST00000420740 428 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 U8.19-201ENST00000459095 133 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 RNU7-169P-201ENST00000459456 61 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 RBM11P1-201ENST00000604951 799 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 AC073869.6-201ENST00000640656 341 ntBASIC0.47□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.329-201ENST00000365209 107 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 SNORD105-201ENST00000386910 85 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 RNU6-613P-201ENST00000410412 108 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 RNA5SP222-201ENST00000411039 105 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.691-201ENST00000516611 103 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 RNU7-4P-201ENST00000516961 62 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 RNU6-264P-201ENST00000517134 104 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 MIR4659A-201ENST00000580269 81 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 MIR4300-201ENST00000581016 96 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 AC022441.3-201ENST00000605737 136 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 AC098679.4-201ENST00000624241 654 ntBASIC0.46□□□□□ -2.34
RPRD1AQ96P16 RNU6-1188P-201ENST00000363795 107 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 SNORD14E-201ENST00000364009 85 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 RNU6-767P-201ENST00000384132 107 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 RNU6-855P-201ENST00000410395 104 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.599-201ENST00000410489 109 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 MCFD2P1-201ENST00000417812 300 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 AC005534.2-201ENST00000431047 433 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.45□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.635-201ENST00000459041 101 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.45□□□□□ -2.34
RPRD1AQ96P16 PRDX4P1-201ENST00000507189 574 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 RNU6-496P-201ENST00000516145 99 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.714-201ENST00000517065 90 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 AC144568.1-201ENST00000520139 137 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 AC012433.1-201ENST00000588916 398 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.45□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.393-201ENST00000383936 102 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 SNORA36.2-201ENST00000384004 127 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 RNU6-1323P-201ENST00000384025 107 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms