Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 SNORD78.2-201ENST00000391076 69 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 SNORA75.6-201ENST00000391318 127 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 RNU4-14P-201ENST00000410858 122 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 AC244098.3-201ENST00000424803 96 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 MTND1P34-201ENST00000438556 671 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 PRDX4P1-201ENST00000507189 574 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 RNU7-4P-201ENST00000516961 62 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 AC144568.1-201ENST00000520139 137 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 MIR4714-201ENST00000580728 77 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 RBM11P1-201ENST00000604951 799 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 AC073869.6-201ENST00000640656 341 ntBASIC0.45□□□□□ -2.34
PKNOX2Q96KN3 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNU6-654P-201ENST00000364373 107 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNU6-767P-201ENST00000384132 107 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNU6-192P-201ENST00000391253 100 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 MIR1827-201ENST00000408549 66 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RPL30P15-201ENST00000457129 321 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNU6-966P-201ENST00000516479 104 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 RNA5SP134-201ENST00000516492 96 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.691-201ENST00000516611 103 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 AC093027.1-201ENST00000546698 429 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 MIR548AR-201ENST00000582191 57 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.44□□□□□ -2.34
PKNOX2Q96KN3 SNORD14E-201ENST00000364009 85 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 RNU6-613P-201ENST00000410412 108 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.646-201ENST00000410980 101 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.635-201ENST00000459041 101 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 AC022441.3-201ENST00000605737 136 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 AC093783.1-201ENST00000612976 329 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 AC007742.2-201ENST00000618226 398 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 AC098679.4-201ENST00000624241 654 ntBASIC0.43□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 RNU6-310P-201ENST00000384655 107 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 SNORD105-201ENST00000386910 85 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 SNORD28B-201ENST00000390993 75 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 RNU6-710P-201ENST00000410424 105 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 MCFD2P1-201ENST00000417812 300 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 MTND1P2-201ENST00000430604 821 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 MIR4659A-201ENST00000580269 81 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 AC084782.3-201ENST00000612282 578 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 AC011476.5-201ENST00000615594 130 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 AC091925.1-201ENST00000623204 462 ntBASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
PKNOX2Q96KN3 RNU6-845P-201ENST00000362578 103 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 SNORD38C-201ENST00000384381 69 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 SNORA2B-201ENST00000384583 137 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 RNU6-855P-201ENST00000410395 104 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 RNU6-370P-201ENST00000411008 104 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 AC005534.2-201ENST00000431047 433 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 RNU7-169P-201ENST00000459456 61 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 MTND4P17-201ENST00000470444 350 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 MIR2115-201ENST00000516657 100 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 RNU7-116P-201ENST00000516940 62 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 AL355375.2-201ENST00000574825 175 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 MIR5690-201ENST00000583739 73 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 AC087685.1-201ENST00000587507 141 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 AC104695.3-201ENST00000604052 296 ntBASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
PKNOX2Q96KN3 MIR1-1-201ENST00000362147 71 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 RNY3P11-201ENST00000364153 102 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 MTCO2P27-201ENST00000420740 428 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 RNU6-830P-201ENST00000516353 107 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 RNU6-911P-201ENST00000516523 104 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 RN7SKP295-201ENST00000517264 153 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 MIR4300-201ENST00000581016 96 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms