Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC027290.2-201ENST00000623210 18662 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 CPHL1P-201ENST00000461341 3407 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 RNU6-957P-201ENST00000363652 99 ntBASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 AC015795.1-201ENST00000513669 327 ntBASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A3Q96HJ5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MS4A3Q96HJ5 RNU6-1079P-201ENST00000362861 110 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 RNA5SP117-201ENST00000365294 118 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 RNA5SP22-201ENST00000365393 109 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 AL023284.1-201ENST00000403956 276 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 AC104619.4-201ENST00000510773 249 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 UBL5P2-201ENST00000583788 219 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 AC005786.1-201ENST00000588553 154 ntBASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.9□□□□□ -1.79
MS4A3Q96HJ5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 RNA5SP447-201ENST00000363749 119 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 RNU6-1187P-201ENST00000364771 110 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 RNU1-63P-201ENST00000383902 164 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 MIR660-201ENST00000385235 97 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 CYP4A43P-201ENST00000568156 121 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 AC091905.2-201ENST00000623143 306 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 AL137790.1-201ENST00000634283 177 ntBASIC3.89□□□□□ -1.79
MS4A3Q96HJ5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 RNU1-109P-201ENST00000383960 147 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 RNU6-604P-201ENST00000390917 100 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 RN7SKP220-201ENST00000410611 288 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 AC017083.1-201ENST00000428093 483 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 AL117339.2-201ENST00000430475 180 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 AL096861.1-201ENST00000610899 123 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 AL138721.1-201ENST00000616756 179 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 AP001486.2-201ENST00000561652 5113 ntBASIC3.88□□□□□ -1.79
MS4A3Q96HJ5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 AL353746.1-201ENST00000566293 6881 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 RNU1-15P-201ENST00000353977 144 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 RPS26P15-201ENST00000488067 348 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 MIR548AO-201ENST00000579992 96 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 MIR5096-201ENST00000583713 70 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 AL513423.1-201ENST00000621695 132 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 ZNF209P-201ENST00000593450 2304 ntBASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.87□□□□□ -1.79
MS4A3Q96HJ5 RNU6-936P-201ENST00000384005 107 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 RNU6-1184P-201ENST00000384588 108 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 MIR4277-201ENST00000578298 84 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 U6.81-201ENST00000612550 106 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 MIR6891-201ENST00000618788 93 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 AL109933.3-201ENST00000619095 188 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 MIR4727-201ENST00000622232 55 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 MIR7641-1-201ENST00000627518 61 ntBASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
MS4A3Q96HJ5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 Y_RNA.239-201ENST00000364444 113 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 RNU1-44P-201ENST00000384453 163 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 AC019129.1-201ENST00000403786 261 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 RNA5SP306-201ENST00000411087 107 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 AC097510.1-201ENST00000510945 133 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 EIF4BP1-201ENST00000554881 351 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 AC092634.7-201ENST00000621022 103 ntBASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
MS4A3Q96HJ5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms