Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC104695.3-201ENST00000604052 296 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 BX284668.6-201ENST00000606899 438 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 AC011373.1-201ENST00000607270 237 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.424-201ENST00000384063 103 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 RNU6-823P-201ENST00000391042 103 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 MIR548P-201ENST00000408336 84 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 RNU6-710P-201ENST00000410424 105 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 RPS20P10-201ENST00000451209 253 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 AL133373.1-201ENST00000497098 94 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.715-201ENST00000517082 110 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 AC020661.2-201ENST00000560114 134 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 FAM106DP-201ENST00000586416 501 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 DEFB117-201ENST00000602356 141 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 MIR6515-201ENST00000619843 57 ntBASIC1.15□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.143-201ENST00000363520 106 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 SNORA22B-201ENST00000383876 138 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 MTCO2P12-201ENST00000427426 682 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 Z98949.2-201ENST00000440996 144 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 AC010655.3-201ENST00000478818 450 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 CYCTP-201ENST00000504253 315 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 SNORA31.2-201ENST00000516019 134 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 RNU6-917P-201ENST00000516294 104 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 RNU7-110P-201ENST00000516891 62 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 RNU6-165P-201ENST00000517170 99 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.721-201ENST00000517207 102 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 RNU6-988P-201ENST00000519081 107 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 AC008269.2-201ENST00000561915 1105 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 AC124312.5-201ENST00000604451 268 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 AC005972.2-201ENST00000604690 348 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 RAC1P9-201ENST00000604990 392 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.183-201ENST00000363882 113 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 U8.5-201ENST00000364528 136 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.310-201ENST00000365063 113 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.368-201ENST00000365547 113 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.456-201ENST00000384232 111 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 MIR1252-201ENST00000408861 65 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 RNU4-30P-201ENST00000410245 143 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 MIR3171-201ENST00000584270 74 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 MIR4762-201ENST00000585261 75 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 AC120024.3-201ENST00000603167 156 ntBASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.222-201ENST00000364264 102 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 AC117470.1-201ENST00000381974 330 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 RNU6-21P-201ENST00000384710 107 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 RNU6-855P-201ENST00000410395 104 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 MLLT10P1-201ENST00000418346 262 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 PIGPP3-201ENST00000425307 415 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 MTCYBP6-201ENST00000441810 138 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 LINC01399-202ENST00000458450 244 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 HMGN1P10-201ENST00000474557 553 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 RNU6-1046P-201ENST00000516538 107 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 MIR4300-201ENST00000581016 96 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 SNORD113-5-201ENST00000607261 78 ntBASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SNRNP40Q96DI7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 RNU6-833P-201ENST00000363486 107 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.158-201ENST00000363651 101 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 RNU6-450P-201ENST00000364654 107 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.286-201ENST00000364813 102 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.380-201ENST00000365663 111 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 SNORA72-201ENST00000384339 132 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 SNORD41-201ENST00000386967 70 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 SNORD115-46-201ENST00000390982 71 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 RNU6-101P-201ENST00000410323 104 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 AC024067.1-201ENST00000426199 223 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 SEPT14P8-201ENST00000508026 178 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 MIR376A1-201ENST00000616574 68 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 AL591926.4-201ENST00000616895 298 ntBASIC1.11□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.276-201ENST00000364732 109 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.341-201ENST00000365341 102 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.383-201ENST00000383855 97 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.389-201ENST00000383924 113 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 MIR452-201ENST00000385020 85 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 AL590004.1-201ENST00000405321 300 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 U8.19-201ENST00000459095 133 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 RNU6-496P-201ENST00000516145 99 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 RNU6-397P-201ENST00000516226 104 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.701-201ENST00000516812 110 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms