Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC005357.1-201ENST00000588399 301 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 RNU6-144P-201ENST00000383951 107 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 RNU6-296P-201ENST00000384608 107 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 SNORD58.1-201ENST00000391313 66 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 RNU6-388P-201ENST00000517012 105 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 RNU6-389P-201ENST00000517048 105 ntBASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM43Q96BQ3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 RN7SKP200-201ENST00000410564 320 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 COX6CP10-201ENST00000416832 224 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 RNU6-437P-201ENST00000459408 95 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 RPS29P11-201ENST00000496507 171 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 RNA5SP437-201ENST00000517249 129 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 MIR8054-201ENST00000620877 86 ntBASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRIM43Q96BQ3 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 MIR367-201ENST00000362299 68 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 RNU6-440P-201ENST00000390882 105 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 HSPE1P9-201ENST00000440046 311 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 AL049830.1-201ENST00000468034 425 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 SNORD116-28-201ENST00000516123 91 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 SNORA28-201ENST00000606769 126 ntBASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.06□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 RNU6-847P-201ENST00000411115 108 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 AC009310.1-201ENST00000414414 451 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 RNU7-34P-201ENST00000459394 64 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 RNU7-28P-201ENST00000516759 62 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 MIR4724-201ENST00000579485 89 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 AL929325.1-201ENST00000603096 117 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 AC141273.2-201ENST00000618989 130 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 AC078938.1-201ENST00000620993 318 ntBASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 STAG3L5P-204ENST00000443759 179 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 MIR3671-201ENST00000580455 88 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 MIR2681-201ENST00000581814 105 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 BX248123.2-201ENST00000606318 124 ntBASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
TRIM43Q96BQ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 RNU6-674P-201ENST00000363831 107 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 RNY1-201ENST00000364228 113 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 SNORA67.5-201ENST00000391036 107 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 RNA5SP482-201ENST00000391269 118 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 COX6CP14-201ENST00000469580 174 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 JPX_2.1-201ENST00000614161 69 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 AL365265.1-201ENST00000621045 234 ntBASIC2.03□□□□□ -2.08
TRIM43Q96BQ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
TRIM43Q96BQ3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 RNU4-41P-201ENST00000364426 143 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 MIR526A2-201ENST00000390198 65 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 RNU7-95P-201ENST00000459222 64 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 AC104435.1-201ENST00000483483 166 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.199-201ENST00000364014 102 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 RNY4P28-201ENST00000365281 93 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms