Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR548AY-201ENST00000617669 107 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 RNU4-30P-201ENST00000410245 143 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 snoU13.23-201ENST00000458863 104 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 snoU13.25-201ENST00000458945 104 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 RPL23AP54-201ENST00000495129 419 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 uc_338.22-201ENST00000622722 187 ntBASIC1.04□□□□□ -2.24
VPS33AQ96AX1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS33AQ96AX1 RNA5SP264-201ENST00000363115 107 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 RNA5SP48-201ENST00000363969 126 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 SNORD14E-201ENST00000364009 85 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 SNORA63.7-201ENST00000365579 123 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 SNORA75.2-201ENST00000391138 150 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 SNORA75.3-201ENST00000391231 150 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS33AQ96AX1 AC007485.1-201ENST00000616755 206 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
VPS33AQ96AX1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VPS33AQ96AX1 U8.7-201ENST00000364940 136 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 AC108667.1-201ENST00000428618 249 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 POLR2KP2-201ENST00000438155 177 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 AC117454.1-201ENST00000491120 168 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 SNORA18.7-201ENST00000516910 131 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS33AQ96AX1 AP003716.2-201ENST00000528260 108 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 MIR4764-201ENST00000580680 88 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 MIR2681-201ENST00000581814 105 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 PART1_1.1-201ENST00000611761 217 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 AL353997.5-201ENST00000618886 171 ntBASIC1.02□□□□□ -2.25
VPS33AQ96AX1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS33AQ96AX1 SNORD42.2-201ENST00000365570 69 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 RNU6-130P-201ENST00000411112 103 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 MTATP6P23-201ENST00000440153 476 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS33AQ96AX1 AL117351.2-201ENST00000513571 157 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 AC136628.3-201ENST00000521868 290 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 MIR3145-201ENST00000580727 82 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.01□□□□□ -2.25
VPS33AQ96AX1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VPS33AQ96AX1 RNU6-674P-201ENST00000363831 107 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 SNORD38C-201ENST00000384381 69 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 MTND4P19-201ENST00000446659 478 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 SNORD123-201ENST00000459473 70 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1□□□□□ -2.25
VPS33AQ96AX1 AC015712.3-201ENST00000559380 164 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 AC090971.5-201ENST00000621102 293 ntBASIC1□□□□□ -2.25
VPS33AQ96AX1 MIR103A2-201ENST00000362154 78 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.222-201ENST00000364264 102 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.796-201ENST00000364268 102 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.242-201ENST00000364473 110 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.799-201ENST00000364992 102 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 RNU6-442P-201ENST00000383968 104 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 AP1B1P2-201ENST00000416196 106 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 RNU6-437P-201ENST00000459408 95 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 RNU7-41P-201ENST00000515917 61 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 AL157834.3-201ENST00000615543 103 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 SEPT14P17-201ENST00000617978 177 ntBASIC0.99□□□□□ -2.25
VPS33AQ96AX1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VPS33AQ96AX1 RNU4-80P-201ENST00000363200 141 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 RNU6-1209P-201ENST00000363655 107 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 SNORA72.4-201ENST00000384174 132 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 MIR802-201ENST00000390235 94 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 BTF3P4-201ENST00000418852 495 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 RNU7-141P-201ENST00000459304 62 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 AC010655.3-201ENST00000478818 450 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 RNU6-1007P-201ENST00000516586 107 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 AC090574.1-201ENST00000623186 233 ntBASIC0.98□□□□□ -2.25
VPS33AQ96AX1 Y_RNA.445-201ENST00000384168 102 ntBASIC0.97□□□□□ -2.25
VPS33AQ96AX1 MIR942-201ENST00000401111 86 ntBASIC0.97□□□□□ -2.25
VPS33AQ96AX1 SNORA36B-201ENST00000410438 131 ntBASIC0.97□□□□□ -2.25
VPS33AQ96AX1 RNU6-830P-201ENST00000516353 107 ntBASIC0.97□□□□□ -2.25
VPS33AQ96AX1 RNU11-2P-201ENST00000516898 142 ntBASIC0.97□□□□□ -2.25
VPS33AQ96AX1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS33AQ96AX1 MIR376A1-201ENST00000616574 68 ntBASIC0.97□□□□□ -2.25
VPS33AQ96AX1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS33AQ96AX1 MIR369-201ENST00000362155 70 ntBASIC0.96□□□□□ -2.26
VPS33AQ96AX1 Y_RNA.183-201ENST00000363882 113 ntBASIC0.96□□□□□ -2.26
VPS33AQ96AX1 RNA5SP99-201ENST00000364020 114 ntBASIC0.96□□□□□ -2.26
VPS33AQ96AX1 Y_RNA.286-201ENST00000364813 102 ntBASIC0.96□□□□□ -2.26
VPS33AQ96AX1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.96□□□□□ -2.26
VPS33AQ96AX1 MIR1185-1-201ENST00000408598 86 ntBASIC0.96□□□□□ -2.26
VPS33AQ96AX1 MTND4LP11-201ENST00000422184 280 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 386.9 ms