Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD2Q8WV60 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 RNU6-129P-201ENST00000391022 107 ntBASIC3.88□□□□□ -1.79
PTCD2Q8WV60 SNORA11.4-201ENST00000408823 129 ntBASIC3.88□□□□□ -1.79
PTCD2Q8WV60 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 RN7SL93P-201ENST00000463035 293 ntBASIC3.88□□□□□ -1.79
PTCD2Q8WV60 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 AL513043.2-201ENST00000573941 143 ntBASIC3.88□□□□□ -1.79
PTCD2Q8WV60 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTCD2Q8WV60 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PTCD2Q8WV60 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCD2Q8WV60 SNORD6-201ENST00000365444 73 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 AL359837.1-201ENST00000381357 287 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 RNU6-613P-201ENST00000410412 108 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 RNU6-1190P-201ENST00000410811 104 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 AL049873.1-201ENST00000480540 376 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 RN7SL323P-201ENST00000494712 295 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 AC244205.2-202ENST00000635781 342 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 CEP170P1-201ENST00000502249 4587 ntBASIC3.87□□□□□ -1.79
PTCD2Q8WV60 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PTCD2Q8WV60 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCD2Q8WV60 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.86□□□□□ -1.79
PTCD2Q8WV60 AC093908.1-201ENST00000623125 8092 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTCD2Q8WV60 RNU1-18P-201ENST00000363062 164 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 RNU6-833P-201ENST00000363486 107 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 SEM1P1-201ENST00000506694 209 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 AL020996.3-201ENST00000606617 222 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 AL121772.2-201ENST00000614331 297 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.86□□□□□ -1.79
PTCD2Q8WV60 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTCD2Q8WV60 AL442644.1-201ENST00000454390 3105 ntBASIC3.86□□□□□ -1.79
PTCD2Q8WV60 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 AL355596.1-201ENST00000565399 3996 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 SNORD38.2-201ENST00000384470 69 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 MIR516B2-201ENST00000385190 85 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 AC018868.1-201ENST00000491307 315 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 SNORA67.7-201ENST00000516664 135 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 AC087499.8-201ENST00000578406 226 ntBASIC3.85□□□□□ -1.79
PTCD2Q8WV60 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD2Q8WV60 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PTCD2Q8WV60 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCD2Q8WV60 Y_RNA.168-201ENST00000363740 102 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 SNORA25B-201ENST00000365507 128 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 Y_RNA.448-201ENST00000384185 108 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 RNU6-480P-201ENST00000384332 107 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 RNU6-1307P-201ENST00000391012 103 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 RNU6-519P-201ENST00000410590 108 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 Z98742.3-201ENST00000418637 326 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 AC245047.7-201ENST00000440265 293 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 AC004223.1-201ENST00000479840 271 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 AC234781.5-201ENST00000508429 271 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 MTND5P40-201ENST00000559945 246 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 MIR3186-201ENST00000577404 85 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCD2Q8WV60 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCD2Q8WV60 AP001486.2-201ENST00000561652 5113 ntBASIC3.84□□□□□ -1.79
PTCD2Q8WV60 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCD2Q8WV60 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCD2Q8WV60 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTCD2Q8WV60 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
PTCD2Q8WV60 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD2Q8WV60 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD2Q8WV60 RNA5SP493-201ENST00000364115 91 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 MIR554-201ENST00000384874 96 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCD2Q8WV60 RNU7-73P-201ENST00000458743 63 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 RNU7-12P-201ENST00000516030 62 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCD2Q8WV60 MIR3158-1-201ENST00000583596 81 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.83□□□□□ -1.8
PTCD2Q8WV60 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD2Q8WV60 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 RNA5SP138-201ENST00000365098 114 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 SNORA62.3-201ENST00000365110 153 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 RNU6-342P-201ENST00000384521 104 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR181B2-201ENST00000385004 89 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR136-201ENST00000385207 82 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 295.7 ms