Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SNED1Q8TER0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
SNED1Q8TER0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SNED1Q8TER0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SNED1Q8TER0 Y_RNA.23-201ENST00000362496 106 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 RNU4-10P-201ENST00000364383 140 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 Y_RNA.400-201ENST00000383963 111 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 RNU4-52P-201ENST00000384209 138 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 SNORA8.3-201ENST00000384679 139 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 RNU6-855P-201ENST00000410395 104 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.84□□□□□ -2.11
SNED1Q8TER0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
SNED1Q8TER0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.84□□□□□ -2.11
SNED1Q8TER0 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 RNU5F-4P-201ENST00000516581 114 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
SNED1Q8TER0 RPL30P11-203ENST00000598995 310 ntBASIC1.84□□□□□ -2.11
SNED1Q8TER0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.84□□□□□ -2.11
SNED1Q8TER0 Y_RNA.24-201ENST00000362508 103 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU6-899P-201ENST00000363947 107 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU6-151P-201ENST00000364158 107 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU4-84P-201ENST00000364200 139 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 SNORA25B-201ENST00000365507 128 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU6-1117P-201ENST00000384525 104 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 MIR626-201ENST00000385032 94 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 MTATP6P29-201ENST00000415057 132 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AL135790.2-201ENST00000437701 267 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU6-1098P-201ENST00000516772 96 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AC100767.1-201ENST00000528178 123 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 MIR4744-201ENST00000581563 82 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AL078603.1-201ENST00000603824 313 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AC091895.1-201ENST00000624494 256 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AC090517.3-201ENST00000625170 141 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 ZNF209P-201ENST00000593450 2304 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNED1Q8TER0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU1-72P-201ENST00000362976 153 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 SNORA72.4-201ENST00000384174 132 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 RNU6-381P-201ENST00000391259 108 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 HMGN2P39-201ENST00000398005 273 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 POLR2J4-204ENST00000418424 324 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SNED1Q8TER0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.83□□□□□ -2.12
SNED1Q8TER0 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 SNORA70.12-201ENST00000516084 153 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 RN7SKP164-201ENST00000516138 266 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 MIR3684-201ENST00000579779 74 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
SNED1Q8TER0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SNED1Q8TER0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SNED1Q8TER0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 snoU2_19.4-201ENST00000364329 80 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 RNU6-275P-201ENST00000364910 107 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 Y_RNA.572-201ENST00000384757 98 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 MIR586-201ENST00000385035 97 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 RNU6-578P-201ENST00000390980 103 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 RNU6-239P-201ENST00000390990 99 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 RNU6-131P-201ENST00000391144 107 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 MIR1185-2-201ENST00000408687 86 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 EBAG9P1-201ENST00000418955 543 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.82□□□□□ -2.12
SNED1Q8TER0 RNU7-14P-201ENST00000459331 62 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.82□□□□□ -2.12
SNED1Q8TER0 RNA5SP220-201ENST00000516298 104 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.82□□□□□ -2.12
SNED1Q8TER0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.82□□□□□ -2.12
SNED1Q8TER0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.82□□□□□ -2.12
SNED1Q8TER0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.82□□□□□ -2.12
SNED1Q8TER0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SNED1Q8TER0 AC068700.1-201ENST00000565862 3754 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU6-1205P-201ENST00000363625 106 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU6-103P-201ENST00000363686 107 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 SNORD32B-201ENST00000364460 84 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU6-818P-201ENST00000364837 108 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU6-959P-201ENST00000384671 107 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 Y_RNA.568-201ENST00000384742 113 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 MIR29B2-201ENST00000385055 81 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 AL162725.1-201ENST00000435405 301 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU7-141P-201ENST00000459304 62 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU7-57P-201ENST00000459540 60 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 SNORA4.4-201ENST00000515921 135 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 SNORD116-25-201ENST00000516517 92 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU6-62P-201ENST00000516526 102 ntBASIC1.81□□□□□ -2.12
SNED1Q8TER0 RNU6-586P-201ENST00000517265 104 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms