Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 AC236972.2-201ENST00000434979 310 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 USP9YP12-201ENST00000450481 570 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 MTATP6P14-201ENST00000455189 673 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-758P-201ENST00000516292 89 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 AC090616.2-202ENST00000584248 222 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 AC018714.1-201ENST00000605028 208 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 AC084368.1-201ENST00000620935 65 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 AP002371.2-201ENST00000624450 503 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.238-201ENST00000364441 102 ntBASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-903P-201ENST00000391270 109 ntBASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 MTCO1P29-201ENST00000496868 288 ntBASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.16□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-454P-201ENST00000364292 107 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 RNU4-68P-201ENST00000364314 141 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 RPL30P16-201ENST00000419341 429 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 RNU2-11P-201ENST00000459191 187 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 RNA5SP169-201ENST00000517268 117 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AC131281.1-201ENST00000522984 164 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AP003072.1-201ENST00000531740 145 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AC108676.2-201ENST00000605225 163 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AC027807.2-201ENST00000616099 408 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AC005609.4-201ENST00000625071 447 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AC073869.9-201ENST00000641610 120 ntBASIC-1.17□□□□□ -2.6
SPTSSBQ8NFR3 AL596211.1-201ENST00000569873 2277 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 U8.6-201ENST00000364939 135 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 RNU7-180P-201ENST00000459240 63 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 MTCO3P38-201ENST00000468910 766 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-138P-201ENST00000515952 107 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 MTND1P24-201ENST00000552175 861 ntBASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.18□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-281P-201ENST00000384212 103 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-535P-201ENST00000384722 107 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 SNORD83B-201ENST00000386745 93 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-602P-201ENST00000411155 105 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 Z95118.1-201ENST00000421372 247 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 AC134698.4-201ENST00000523451 826 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 AL133215.3-201ENST00000609801 448 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 HULC.1-201ENST00000612720 240 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 AC006927.3-201ENST00000638789 384 ntBASIC-1.19□□□□□ -2.6
SPTSSBQ8NFR3 RNA5SP368-201ENST00000364298 116 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 MTCO2P8-201ENST00000412213 658 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 MTATP6P18-201ENST00000417994 673 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 CCDC34P1-201ENST00000507441 517 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 AC011352.1-201ENST00000512300 793 ntBASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.2□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-47P-201ENST00000383866 107 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 SNORA72-201ENST00000384339 132 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 MTND2P18-201ENST00000419962 1030 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 SPINT5P-201ENST00000448174 155 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 AC005972.2-201ENST00000604690 348 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 AC093726.3-201ENST00000637588 150 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 AC099654.12-201ENST00000639868 649 ntBASIC-1.21□□□□□ -2.6
SPTSSBQ8NFR3 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-708P-201ENST00000384217 107 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-913P-201ENST00000390913 95 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 AC108059.2-201ENST00000434626 151 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-437P-201ENST00000459408 95 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 SNORA25.13-201ENST00000516395 103 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 Z84480.1-201ENST00000605131 311 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 AC006441.5-201ENST00000612680 209 ntBASIC-1.22□□□□□ -2.6
SPTSSBQ8NFR3 RNU6-926P-201ENST00000384075 107 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-933P-201ENST00000384424 107 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-83P-201ENST00000384568 112 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 AC009961.2-201ENST00000435771 251 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 MTCO2P16-201ENST00000436962 677 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 AP003168.1-201ENST00000530091 307 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 MTND5P34-201ENST00000568888 325 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 MIR4636-201ENST00000582271 80 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms