Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 MIR378D2-201ENST00000580636 98 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 AC120024.3-201ENST00000603167 156 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 U6.73-201ENST00000619194 103 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.54□□□□□ -2
SHCBP1Q8NEM2 ZNF355P-201ENST00000427301 3216 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.127-201ENST00000363386 109 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 RNA5SP205-201ENST00000364653 136 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 RNA5SP125-201ENST00000364843 120 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 RNU6-597P-201ENST00000365620 102 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 MIR1253-201ENST00000408273 105 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHCBP1Q8NEM2 RNU6-1333P-201ENST00000516162 93 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 RNU6-667P-201ENST00000517186 102 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 AC011604.1-201ENST00000545978 196 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 RPL23AP91-201ENST00000569211 455 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 AL353997.5-201ENST00000618886 171 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
SHCBP1Q8NEM2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
SHCBP1Q8NEM2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHCBP1Q8NEM2 MIR539-201ENST00000365690 78 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1336P-201ENST00000383886 109 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORD116-14-201ENST00000383894 92 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORD116-17-201ENST00000383929 92 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.432-201ENST00000384087 111 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORD116-15-201ENST00000384445 92 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORD116-19-201ENST00000384729 92 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORA79-201ENST00000408376 140 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 RNU2-55P-201ENST00000411146 174 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 HMGN2P34-201ENST00000437647 269 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORD11-201ENST00000459124 84 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 uc_338.4-201ENST00000616635 176 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 TUG1_4.1-201ENST00000619464 181 ntBASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1209P-201ENST00000363655 107 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 RNU1-96P-201ENST00000364163 162 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.796-201ENST00000364268 102 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-978P-201ENST00000364371 103 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.799-201ENST00000364992 102 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 MIR561-201ENST00000385216 97 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 AC011406.1-201ENST00000512440 370 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1299P-201ENST00000516316 100 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 AL160236.1-201ENST00000556317 195 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 MIR6895-201ENST00000613497 78 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 AP001340.1-201ENST00000624405 217 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHCBP1Q8NEM2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 SNORA67.3-201ENST00000384366 140 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 SNORA48.3-201ENST00000391081 134 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.629-201ENST00000411368 105 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 SNORD77.4-201ENST00000516158 81 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 RNU7-128P-201ENST00000517247 62 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 AP001328.1-201ENST00000528550 176 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 MIR2681-201ENST00000581814 105 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 AC073413.2-201ENST00000604332 360 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 AC011603.4-201ENST00000611325 277 ntBASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
SHCBP1Q8NEM2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.91-201ENST00000363042 107 ntBASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 RNU2-56P-201ENST00000516826 190 ntBASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.81-201ENST00000362997 102 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-915P-201ENST00000364943 103 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 SNORA25B-201ENST00000365507 128 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-80P-201ENST00000384195 107 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 MIR562-201ENST00000384894 95 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 AC245047.4-201ENST00000433189 144 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 HMGN2P23-201ENST00000456759 269 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 MIR5694-201ENST00000581190 76 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 U7.2-201ENST00000607576 63 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
SHCBP1Q8NEM2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms