Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL603910.2-201ENST00000407268 136 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 AL034345.1-201ENST00000407768 123 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 U8.19-201ENST00000459095 133 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 RPL23AP54-201ENST00000495129 419 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 AC005357.1-201ENST00000588399 301 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 AL008718.3-201ENST00000610217 321 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 AC013791.1-201ENST00000616619 62 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 snoU18.1-201ENST00000629629 71 ntBASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
PCDH20Q8N6Y1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.117-201ENST00000363294 101 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 SNORA17.3-201ENST00000391159 129 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 RNA5SP482-201ENST00000391269 118 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 AC099513.1-201ENST00000490423 301 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 AC021506.2-201ENST00000612354 169 ntBASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.82-201ENST00000363000 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.92-201ENST00000363043 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 RNU6-457P-201ENST00000363999 107 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.235-201ENST00000364412 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.306-201ENST00000365015 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.312-201ENST00000365089 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.322-201ENST00000365151 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.416-201ENST00000384014 113 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 SNORA36B-201ENST00000410438 131 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.650-201ENST00000459002 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 OR9P1P-201ENST00000496431 281 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 RNA5SP458-201ENST00000516188 119 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.777-201ENST00000516982 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.771-201ENST00000598668 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 AP000942.3-201ENST00000603702 160 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.789-201ENST00000622480 102 ntBASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCDH20Q8N6Y1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.54-201ENST00000362766 105 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.307-201ENST00000365022 117 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 RNU6-211P-201ENST00000384047 107 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 SNORD2.1-201ENST00000458762 69 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 RNU6-437P-201ENST00000459408 95 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 MIR5692C2-201ENST00000577959 77 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
PCDH20Q8N6Y1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 RNU6-144P-201ENST00000383951 107 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 RNU6-203P-201ENST00000384038 104 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.478-201ENST00000384358 107 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.590-201ENST00000410140 107 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 MTND1P19-201ENST00000511780 315 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 BX284668.6-201ENST00000606899 438 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 AL591926.4-201ENST00000616895 298 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 AC073349.3-201ENST00000617616 186 ntBASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCDH20Q8N6Y1 MIR126-201ENST00000362291 85 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 RNU6-674P-201ENST00000363831 107 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 SNORD27-201ENST00000363981 72 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.401-201ENST00000383965 117 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.447-201ENST00000384184 113 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.477-201ENST00000384352 108 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 RNU6-651P-201ENST00000411040 105 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 AL161935.2-201ENST00000414627 60 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 Z98949.2-201ENST00000440996 144 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 HMGN1P7-201ENST00000491722 313 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.679-201ENST00000516416 91 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 MIR4643-201ENST00000577473 78 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 MIR3128-201ENST00000581957 66 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 MIR4282-201ENST00000583613 67 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 AL513423.1-201ENST00000621695 132 ntBASIC1.57□□□□□ -2.16
PCDH20Q8N6Y1 AC068700.1-201ENST00000565862 3754 ntBASIC1.56□□□□□ -2.16
PCDH20Q8N6Y1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
PCDH20Q8N6Y1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.56□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.56□□□□□ -2.16
PCDH20Q8N6Y1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms