Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 RNU6-578P-201ENST00000390980 103 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 RNA5SP425-201ENST00000410336 112 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 AL365434.2-201ENST00000607979 234 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 AC108706.1-201ENST00000611053 297 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 AC064859.1-201ENST00000624741 174 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 AC100821.1-201ENST00000523153 2479 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 RNU6-312P-201ENST00000364629 107 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 RNA5SP496-201ENST00000391240 109 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AL512604.1-201ENST00000404812 257 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AL606845.1-201ENST00000404881 255 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 SUMO1P3-201ENST00000439961 304 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 RPS26P45-201ENST00000471748 340 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 RNU6-341P-201ENST00000516973 96 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 MIR2681-201ENST00000581814 105 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 MIR3945-201ENST00000581853 98 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AC104465.1-201ENST00000611365 139 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 AL391903.3-201ENST00000612158 163 ntBASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CLIP4Q8N3C7 RNU6-275P-201ENST00000364910 107 ntBASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 RNU7-94P-201ENST00000459576 63 ntBASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 RPL23AP91-201ENST00000569211 455 ntBASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 MIR5094-201ENST00000578766 85 ntBASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLIP4Q8N3C7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.8-201ENST00000362353 102 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 SNORA70B-201ENST00000384210 135 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 AL603908.1-201ENST00000406098 201 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 RNU6-394P-201ENST00000410735 107 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 RNA5SP501-201ENST00000410990 112 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 SEPT7P4-201ENST00000437076 306 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 RNU6-561P-201ENST00000516222 102 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 RNU6-255P-201ENST00000516957 105 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 AC109810.1-201ENST00000534066 224 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 AC084364.2-201ENST00000546924 395 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 AL049861.1-201ENST00000603130 150 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 AC021753.1-201ENST00000635724 168 ntBASIC1.78□□□□□ -2.12
CLIP4Q8N3C7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 RNU6-804P-201ENST00000384286 107 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 MIR562-201ENST00000384894 95 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 MIR548M-201ENST00000408260 86 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 RN7SKP101-201ENST00000411376 320 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 AL121914.1-201ENST00000450188 156 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 AL049830.1-201ENST00000468034 425 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 RNU6-1212P-201ENST00000517023 104 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 MIR3144-201ENST00000579460 79 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 AC022217.4-201ENST00000604389 163 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 AC069114.2-201ENST00000604699 304 ntBASIC1.77□□□□□ -2.13
CLIP4Q8N3C7 ZNF702P-202ENST00000434269 1966 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 RNA5SP276-201ENST00000362580 94 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 RNU6-728P-201ENST00000365375 104 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 RNY3P5-201ENST00000384127 102 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 SNORA48.1-201ENST00000390879 135 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 Y_RNA.622-201ENST00000411091 108 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 AL606517.2-201ENST00000442855 241 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 SNRPGP8-201ENST00000454064 226 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 AC023449.1-201ENST00000454464 154 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 AL358944.1-201ENST00000528537 144 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 MIR4431-201ENST00000579990 94 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 AL021707.8-201ENST00000609428 183 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 JPX_2.1-201ENST00000614161 69 ntBASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
CLIP4Q8N3C7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLIP4Q8N3C7 SNORA1B-201ENST00000362535 133 ntBASIC1.75□□□□□ -2.13
CLIP4Q8N3C7 RNU6-774P-201ENST00000363238 107 ntBASIC1.75□□□□□ -2.13
CLIP4Q8N3C7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms