Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPS29P31-201ENST00000446147 164 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 RPL23AP63-201ENST00000498752 471 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.659-201ENST00000515994 113 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 RNU6-521P-201ENST00000516663 105 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.705-201ENST00000516862 110 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 AC090821.2-201ENST00000523552 176 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CCDC116Q8IYX3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-13-201ENST00000363358 82 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-16-201ENST00000363887 82 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RNU6-219P-201ENST00000364728 107 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-1-201ENST00000364961 82 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.377-201ENST00000365644 108 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.494-201ENST00000384432 111 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RNU6-443P-201ENST00000384780 107 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RNU6-887P-201ENST00000410660 100 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 PRSS3P4-201ENST00000453323 162 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RN7SKP18-201ENST00000516005 275 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RNU1-95P-201ENST00000516357 160 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 RNU1-128P-201ENST00000516704 160 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 AC007536.1-201ENST00000533382 349 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 MIR4666B-201ENST00000578142 81 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 ZNF861P-201ENST00000588126 639 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 AP003355.3-201ENST00000623465 114 ntBASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC116Q8IYX3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-34-201ENST00000362441 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-12-201ENST00000362583 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNA5SP124-201ENST00000362739 110 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-29-201ENST00000362834 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-9-201ENST00000362912 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-21-201ENST00000362963 81 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-14-201ENST00000363090 81 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-41-201ENST00000363608 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-11-201ENST00000363616 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-5-201ENST00000363633 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-39-201ENST00000363694 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-4-201ENST00000363810 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-6-201ENST00000363942 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-42-201ENST00000364273 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-15-201ENST00000364809 81 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-26-201ENST00000365067 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-10-201ENST00000365073 81 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.313-201ENST00000365095 103 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-43-201ENST00000365503 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SNORD115-36-201ENST00000365629 82 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.437-201ENST00000384113 113 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNU6-1201P-201ENST00000384227 107 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.467-201ENST00000384297 102 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNU6-163P-201ENST00000384396 106 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNU7-113P-201ENST00000459273 62 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNU7-171P-201ENST00000459581 62 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNU6-857P-201ENST00000515893 110 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 RNU6-1116P-201ENST00000517269 99 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 AC026333.2-201ENST00000542164 106 ntBASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.171-201ENST00000363760 102 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 AC104332.2-201ENST00000429959 156 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 RN7SL504P-201ENST00000494496 287 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 MIR4298-201ENST00000584380 73 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 AC245060.5-201ENST00000610778 3293 ntBASIC3.31□□□□□ -1.88
CCDC116Q8IYX3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 SNORA25B-201ENST00000365507 128 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 SNORA5A-201ENST00000384111 134 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 RNU6-616P-201ENST00000384353 107 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 MIR449B-201ENST00000384995 97 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 RNA5SP109-201ENST00000391010 116 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 AL135938.1-201ENST00000443141 297 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 STAG3L5P-204ENST00000443759 179 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 RNU7-45P-201ENST00000459460 63 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 RNU6-1018P-201ENST00000516577 106 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 RNU6-1258P-201ENST00000516911 111 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 IGLV3-17-201ENST00000519099 244 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 AL161756.2-201ENST00000604597 246 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 AC022149.2-201ENST00000621061 203 ntBASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC116Q8IYX3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms