Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 MIR548J-201ENST00000408833 112 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.605-201ENST00000410577 105 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 AC091951.2-201ENST00000500762 203 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 PRDX4P1-201ENST00000507189 574 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 RNU6-559P-201ENST00000516151 98 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 RNU7-43P-201ENST00000516554 64 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 AC113139.1-201ENST00000605049 239 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 snoU2-30.1-201ENST00000365012 70 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 AF228730.4-201ENST00000421457 183 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 SNRPGP14-201ENST00000435400 219 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.653-201ENST00000459091 95 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 RNU6-277P-201ENST00000516272 106 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 RNU6-699P-201ENST00000517081 110 ntBASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.62□□□□□ -2.31
CCDC65Q8IXS2 AC134026.1-201ENST00000623249 2239 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 RNU6-490P-201ENST00000362985 107 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.314-201ENST00000365114 102 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 RNU6-1175P-201ENST00000365200 107 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.505-201ENST00000384489 102 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 SNORD28B-201ENST00000390993 75 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 RNU6-131P-201ENST00000391144 107 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.619-201ENST00000410951 90 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 AC098869.1-201ENST00000481627 292 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 SNORA20.3-201ENST00000516880 132 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 RN7SKP295-201ENST00000517264 153 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 MIR548AR-201ENST00000582191 57 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 AL355073.2-201ENST00000612106 557 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 U6atac.1-201ENST00000616025 117 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 MTND4LP32-201ENST00000636111 270 ntBASIC0.61□□□□□ -2.31
CCDC65Q8IXS2 RNU6-654P-201ENST00000364373 107 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 AL590004.1-201ENST00000405321 300 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 AC138393.2-201ENST00000414742 246 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 U8.19-201ENST00000459095 133 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 AC010205.1-201ENST00000616668 449 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 AC091925.1-201ENST00000623204 462 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 MIR6516-201ENST00000630554 81 ntBASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC65Q8IXS2 RNA5SP48-201ENST00000363969 126 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.496-201ENST00000384444 101 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 MIR15B-201ENST00000385045 98 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 RNU6-855P-201ENST00000410395 104 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 HMGN2P32-201ENST00000444648 269 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 AC010655.3-201ENST00000478818 450 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 NDUFA4P2-201ENST00000489989 244 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 RNU11-2P-201ENST00000516898 142 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 RNU6-94P-201ENST00000607728 107 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 MIR4272-201ENST00000635924 64 ntBASIC0.59□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.148-201ENST00000363557 117 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.341-201ENST00000365341 102 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.390-201ENST00000383932 102 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.463-201ENST00000384271 102 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 SNORD89-201ENST00000390981 114 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 AC099799.1-201ENST00000439809 192 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 RBMX2P4-201ENST00000441256 376 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 AC005042.3-201ENST00000453230 174 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.718-201ENST00000517110 102 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 POLR3GP1-201ENST00000594073 261 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 VN1R91P-201ENST00000594377 169 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 AP003357.1-201ENST00000604497 148 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 AC025253.1-201ENST00000613623 543 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 AC084781.2-201ENST00000615568 161 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 AC008133.2-201ENST00000624540 351 ntBASIC0.58□□□□□ -2.32
CCDC65Q8IXS2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.203-201ENST00000364106 102 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.796-201ENST00000364268 102 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 U8.7-201ENST00000364940 136 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.799-201ENST00000364992 102 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 RNU6-1040P-201ENST00000383974 107 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.456-201ENST00000384232 111 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 RNY4P36-201ENST00000391116 96 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 RNU6-710P-201ENST00000410424 105 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 AC098614.3-201ENST00000438957 440 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 AC024405.2-202ENST00000532731 184 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 DEFB117-201ENST00000602356 141 ntBASIC0.57□□□□□ -2.32
CCDC65Q8IXS2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.387-201ENST00000383918 102 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.458-201ENST00000384240 102 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 MIR628-201ENST00000385229 95 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 SNORD111-201ENST00000408139 94 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms