Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR9-1-201ENST00000385198 89 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 SNORD11-201ENST00000459124 84 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 RNU6-1291P-201ENST00000516591 104 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 RNU6-126P-201ENST00000516685 103 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 AC006254.2-201ENST00000603259 279 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 SNORD14A-201ENST00000606526 91 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 U6.108-201ENST00000637764 58 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 RNU6-859P-201ENST00000362728 107 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 SNORA33-201ENST00000363664 130 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 RNU6-647P-201ENST00000364243 107 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 RNU1-51P-201ENST00000365345 176 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 MIR597-201ENST00000384968 97 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 MIR887-201ENST00000401258 79 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 AL138827.1-201ENST00000402666 306 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 AC007064.1-201ENST00000412238 351 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 AC099677.2-201ENST00000436385 175 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.651-201ENST00000459380 103 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 SNORA72.7-201ENST00000516349 94 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 MIR4529-201ENST00000578110 78 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 AC097639.2-201ENST00000603159 172 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 Pinc.1-201ENST00000616452 154 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 U1.36-201ENST00000620684 176 ntBASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPAS4Q8IUM7 MIR450A1-201ENST00000362262 91 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 RNU6-950P-201ENST00000384651 107 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.649-201ENST00000459077 103 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 RN7SL442P-201ENST00000473804 320 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 RN7SL297P-201ENST00000483161 293 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 RN7SKP19-201ENST00000516016 252 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 SNORA18.4-201ENST00000516440 124 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 RNU7-149P-201ENST00000516739 59 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 AL022345.2-201ENST00000606307 135 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NPAS4Q8IUM7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 MAPK10-266ENST00000641066 6555 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.52-201ENST00000362760 96 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.486-201ENST00000384398 107 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 RNA5SP21-201ENST00000410917 96 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 AC245047.3-201ENST00000429428 127 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 TRBV12-1-201ENST00000479785 344 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 HMGN1P7-201ENST00000491722 313 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 MIR5094-201ENST00000578766 85 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 AC025166.1-201ENST00000612411 163 ntBASIC3.04□□□□□ -1.92
NPAS4Q8IUM7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 MIRLET7F2-201ENST00000385277 83 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 HMGN2P3-201ENST00000433603 273 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 HMGN2P5-201ENST00000436882 273 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 AL049830.1-201ENST00000468034 425 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 RNU1-104P-201ENST00000517280 175 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 IGKV1-22-201ENST00000524313 326 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 MIR5582-201ENST00000579697 68 ntBASIC3.03□□□□□ -1.92
NPAS4Q8IUM7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.346-201ENST00000365385 112 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 SNORA26-201ENST00000391286 122 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 MIR1283-2-201ENST00000408621 87 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 RNA5SP385-201ENST00000515947 110 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 RNU7-28P-201ENST00000516759 62 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 MIR4662B-201ENST00000579498 81 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 MIR5194-201ENST00000582634 120 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 CTSLP2-204ENST00000629029 392 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 MTND5P18-201ENST00000445624 1801 ntBASIC3.02□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.495-201ENST00000384435 112 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 RNU6-880P-201ENST00000384526 107 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 MIR891A-201ENST00000401237 79 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 RNA5SP127-201ENST00000411051 133 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 OR9P1P-201ENST00000496431 281 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 AC007751.1-201ENST00000529260 376 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 AC087685.1-201ENST00000587507 141 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 SNORA28-201ENST00000606769 126 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 AC022513.1-201ENST00000624512 117 ntBASIC3.01□□□□□ -1.93
NPAS4Q8IUM7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3□□□□□ -1.93
NPAS4Q8IUM7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NPAS4Q8IUM7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.66-201ENST00000362862 102 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.116-201ENST00000363292 103 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 RNU6-1138P-201ENST00000365359 106 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 MIR624-201ENST00000385217 97 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 SNORA48.1-201ENST00000390879 135 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 RNA5SP508-201ENST00000411327 119 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 HMGN2P35-201ENST00000412164 270 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3□□□□□ -1.93
NPAS4Q8IUM7 SNRPGP10-201ENST00000432323 225 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 AC084364.2-201ENST00000546924 395 ntBASIC3□□□□□ -1.93
NPAS4Q8IUM7 uc_338.28-201ENST00000612082 187 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms